RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 UAP1Q16222 522 aaPredicted RBP16.3■□□□□ 0.2
LTBR-215ENST00000546296 CCSMST1Q4G0I0 132 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 UBE2R2Q712K3 238 aaPredicted RBP16.3■□□□□ 0.2
LTBR-215ENST00000546296 PRSS42Q7Z5A4 293 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 C2orf73Q8N5S3 287 aaPredicted RBP16.3■□□□□ 0.2
LTBR-215ENST00000546296 EIF1ADQ8N9N8 165 aaKnown RBP16.3■□□□□ 0.2
LTBR-215ENST00000546296 OR9A1PQ8NGU1 263 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 UHMK1Q8TAS1 419 aaKnown RBP16.3■□□□□ 0.2
LTBR-215ENST00000546296 MDM1Q8TC05 714 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 UBXN4Q92575 508 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 TSPAN17Q96FV3 270 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 IL17FQ96PD4 163 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 MAP3K3Q99759 626 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 RAB11FIP5Q9BXF6 653 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 KNTC1P50748 2209 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 TLCD2A6NGC4 264 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 ARHGEF33A8MVX0 844 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 ISM1B1AKI9 464 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 MAP3K7O43318 606 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 C1QAP02745 245 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 FAM153BP0C7A2 387 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 ITIH1P19827 911 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 PMS2P54278 862 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 GRB7Q14451 532 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 FAM153CQ494X1 144 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 UBAP2Q5T6F2 1119 aaKnown RBP16.29■□□□□ 0.2
LTBR-215ENST00000546296 TRMT10CQ7L0Y3 403 aaKnown RBP16.29■□□□□ 0.2
LTBR-215ENST00000546296 GSPT2Q8IYD1 628 aaKnown RBP16.29■□□□□ 0.2
LTBR-215ENST00000546296 NKAPQ8N5F7 415 aaKnown RBP16.29■□□□□ 0.2
LTBR-215ENST00000546296 OR2L8Q8NGY9 312 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 SLC46A1Q96NT5 459 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 MCMBPQ9BTE3 642 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 TMEM121BQ9BXQ6 578 aaPredicted RBP16.29■□□□□ 0.2
LTBR-215ENST00000546296 ZNF768Q9H5H4 540 aaKnown RBP16.29■□□□□ 0.2
LTBR-215ENST00000546296 ACSS3Q9H6R3 686 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 CAB39LQ9H9S4 337 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 SYTL2Q9HCH5 934 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 OCIAD1Q9NX40 245 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 SLC39A1Q9NY26 324 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 SPHK1Q9NYA1 384 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 POMT2Q9UKY4 750 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 IKBKGQ9Y6K9 419 aa16.29■□□□□ 0.2
LTBR-215ENST00000546296 A0A087WUV0 522 aaPredicted RBP16.28■□□□□ 0.2
LTBR-215ENST00000546296 IGHV5-51A0A0C4DH38 117 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 PABPN1LA6NDY0 278 aaKnown RBP16.28■□□□□ 0.2
LTBR-215ENST00000546296 GFYI3L273 518 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 C8GP07360 202 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 FGF3P11487 239 aaPredicted RBP16.28■□□□□ 0.2
LTBR-215ENST00000546296 CYP2A7P20853 494 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 ETV5P41161 510 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 ZNF460Q14592 562 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 KIR2DS3Q14952 304 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.28■□□□□ 0.2
LTBR-215ENST00000546296 TMEM164Q5U3C3 297 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 FBXO38Q6PIJ6 1188 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 TAX1BP1Q86VP1 789 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 CARFQ8N187 725 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 LMNTD1Q8N9Z9 388 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 MCOLN3Q8TDD5 553 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 KLHL6Q8WZ60 621 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 USP7Q93009 1102 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 SLC22A18Q96BI1 424 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 PRR11Q96HE9 360 aaPredicted RBP16.28■□□□□ 0.2
LTBR-215ENST00000546296 PKP4Q99569 1192 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 GPR22Q99680 433 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 ANKZF1Q9H8Y5 726 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 POPDC3Q9HBV1 291 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 GPAMQ9HCL2 828 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 C1GALT1Q9NS00 363 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 THSD1Q9NS62 852 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 SOHLH2Q9NX45 425 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 SPATA7Q9P0W8 599 aa16.28■□□□□ 0.2
LTBR-215ENST00000546296 KRT87PA6NCN2 255 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 TMEM8BA6NDV4 472 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 SLC9B1P1A6NJY1 282 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 B4E171 279 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 MYO1CO00159 1063 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 SLC16A5O15375 505 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 DXOO77932 396 aaKnown RBP16.27■□□□□ 0.2
LTBR-215ENST00000546296 ZBTB11O95625 1053 aaPredicted RBP16.27■□□□□ 0.2
LTBR-215ENST00000546296 ITGA2BP08514 1039 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 HIST1H2AGP0C0S8 130 aaPredicted RBP16.27■□□□□ 0.2
LTBR-215ENST00000546296 UGT2B7P16662 529 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 STMN1P16949 149 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 NELFEP18615 380 aaKnown RBP16.27■□□□□ 0.2
LTBR-215ENST00000546296 HIST1H2ADP20671 130 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 HSD17B2P37059 387 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 TSPAN7P41732 249 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 MLLT3P42568 568 aaPredicted RBP16.27■□□□□ 0.2
LTBR-215ENST00000546296 HSD11B2P80365 405 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 MC2RQ01718 297 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 FOXM1Q08050 763 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 TMTC4Q5T4D3 741 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 ANKS6Q68DC2 871 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 SPESP1Q6UW49 350 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 KMT5CQ86Y97 462 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 CEP97Q8IW35 865 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 LINC01555Q8NAE3 123 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 FBXO15Q8NCQ5 510 aaPredicted RBP16.27■□□□□ 0.2
LTBR-215ENST00000546296 ZCCHC14Q8WYQ9 949 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms