RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 DBTP11182 482 aaKnown RBP13.9□□□□□ -0.18
SRP54-202ENST00000546080 ALOX12P18054 663 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 S100A5P33763 92 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 TBX4P57082 545 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 ZNF45Q02386 682 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 CACHD1Q5VU97 1274 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 UBE2UQ5VVX9 321 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 GLT6D1Q7Z4J2 308 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 MILR1Q7Z6M3 343 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 LRRTM3Q86VH5 581 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 SLC22A15Q8IZD6 547 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 AMER2Q8N7J2 671 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 CHAC2Q8WUX2 184 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 LPPQ93052 612 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 OR52E6Q96RD3 313 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 ZFP14Q9HCL3 533 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 ZMYM5Q9UJ78 669 aa13.9□□□□□ -0.18
SRP54-202ENST00000546080 TSR3Q9UJK0 312 aaKnown RBP13.9□□□□□ -0.18
SRP54-202ENST00000546080 PGLSO95336 258 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 ZNF682O95780 498 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 EFNA1P20827 205 aaPredicted RBP13.89□□□□□ -0.19
SRP54-202ENST00000546080 MAGEA2P43356 314 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 MFSD10Q14728 455 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 PCBP2Q15366 365 aaKnown RBP eCLIP13.89□□□□□ -0.193e-6■■■■□ 22.2
SRP54-202ENST00000546080 CTSL3PQ5NE16 218 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 OR2T5Q6IEZ7 315 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 CCBE1Q6UXH8 406 aaPredicted RBP13.89□□□□□ -0.19
SRP54-202ENST00000546080 USP43Q70EL4 1123 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 VASH1Q7L8A9 365 aaPredicted RBP13.89□□□□□ -0.19
SRP54-202ENST00000546080 SNX20Q7Z614 316 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 TSPYL5Q86VY4 417 aaPredicted RBP13.89□□□□□ -0.19
SRP54-202ENST00000546080 CALHM3Q86XJ0 350 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 METTL4Q8N3J2 472 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 PARP16Q8N5Y8 322 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 KRTCAP2Q8N6L1 136 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 OR10T2Q8NGX3 314 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 OR2T29Q8NH02 315 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 FCGR1BQ92637 280 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 TBC1D20Q96BZ9 403 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 PKMYT1Q99640 499 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 EMILIN2Q9BXX0 1053 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 NDRG4Q9ULP0 352 aaKnown RBP13.89□□□□□ -0.19
SRP54-202ENST00000546080 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.89□□□□□ -0.19
SRP54-202ENST00000546080 ABCG2Q9UNQ0 655 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 SAMD4AQ9UPU9 718 aaKnown RBP13.89□□□□□ -0.19
SRP54-202ENST00000546080 KCNH4Q9UQ05 1017 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 SPO11Q9Y5K1 396 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 LTBP3Q9NS15 1303 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 HAT1O14929 419 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 OR1I1O60431 355 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 MYCLP1P12525 358 aaPredicted RBP13.89□□□□□ -0.19
SRP54-202ENST00000546080 ACVRL1P37023 503 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 LIPAP38571 399 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 BRCC3P46736 316 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 DEFA1P59665 94 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 DEFA3P59666 94 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 SERINC3Q13530 473 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 PROX2Q3B8N5 592 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 KIAA1614Q5VZ46 1190 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 HEATR4Q86WZ0 1026 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 CIR1Q86X95 450 aaPredicted RBP13.89□□□□□ -0.19
SRP54-202ENST00000546080 SPATA2LQ8IUW3 424 aaPredicted RBP13.89□□□□□ -0.19
SRP54-202ENST00000546080 TTC16Q8NEE8 873 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 IGSF8Q969P0 613 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 RMDN1Q96DB5 314 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 SLC39A13Q96H72 371 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 PDLIM5Q96HC4 596 aaKnown RBP13.89□□□□□ -0.19
SRP54-202ENST00000546080 MYOCQ99972 504 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 CPPED1Q9BRF8 314 aaPredicted RBP13.89□□□□□ -0.19
SRP54-202ENST00000546080 OR2B2Q9GZK3 357 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 CLMPQ9H6B4 373 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 IPPKQ9H8X2 491 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 TM9SF3Q9HD45 589 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 TRPV5Q9NQA5 729 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 KRT84Q9NSB2 600 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 RNF6Q9Y252 685 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 CCL27Q9Y4X3 112 aa13.89□□□□□ -0.19
SRP54-202ENST00000546080 TRBV5-3A0A0A0MS03 114 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 FAM172BPA6NC97 362 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 TNFRSF10BO14763 440 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 PER2O15055 1255 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 MED26O95402 600 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 APOA1P02647 267 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 GADD45AP24522 165 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 RPL9P32969 192 aaKnown RBP13.88□□□□□ -0.19
SRP54-202ENST00000546080 GGT5P36269 586 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 CTSKP43235 329 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 TTPAP49638 278 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 TSPY1Q01534 308 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 PRKCDQ05655 676 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 UPP1Q16831 310 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 PARP15Q460N3 678 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 RAP1GAP2Q684P5 730 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 PSAPL1Q6NUJ1 521 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 ZNF467Q7Z7K2 595 aaPredicted RBP13.88□□□□□ -0.19
SRP54-202ENST00000546080 SAPCD2Q86UD0 394 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 HORMAD1Q86X24 394 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 PLPP6Q8IY26 295 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 C10orf111Q8N326 155 aa13.88□□□□□ -0.19
SRP54-202ENST00000546080 TMEM132CQ8N3T6 1108 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms