RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 TUBA1AQ71U36 451 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 SNX20Q7Z614 316 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 ZDHHC21Q8IVQ6 265 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 ABI1Q8IZP0 508 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 LPCAT1Q8NF37 534 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 NLGN2Q8NFZ4 835 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 RHOXF1Q8NHV9 184 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 STARD8Q92502 1023 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 FCGR1BQ92637 280 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 ITCHQ96J02 903 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 ZBED2Q9BTP6 218 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 NTMT1Q9BV86 223 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 FAM126AQ9BYI3 521 aaPredicted RBP8.56□□□□□ -1.04
TDP1-204ENST00000545686 SLIRPQ9GZT3 109 aaKnown RBP8.56□□□□□ -1.04
TDP1-204ENST00000545686 ACOT13Q9NPJ3 140 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 UGT2A1Q9Y4X1 527 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 PCDHB14Q9Y5E9 798 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 A3GALT2U3KPV4 340 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 A0A0D9SEW6 157 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 ANKRD66B4E2M5 251 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 TAF4O00268 1085 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 AXIN1O15169 862 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 SEC24AO95486 1093 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 TBX18O95935 607 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 EBLN1P0CF75 366 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 EFNA1P20827 205 aaPredicted RBP8.56□□□□□ -1.04
TDP1-204ENST00000545686 PRKACGP22612 351 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 SERPINB1P30740 379 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 UGT2B10P36537 528 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 PIK3CGP48736 1102 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 MASP1P48740 699 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 CLK3P49761 638 aaKnown RBP8.56□□□□□ -1.04
TDP1-204ENST00000545686 CDH4P55283 916 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 FCGRTP55899 365 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 VBP1P61758 197 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 CD300CQ08708 224 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 AAK1Q2M2I8 961 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 ZNF181Q2M3W8 571 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 INAVAQ3KP66 663 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 USP39Q53GS9 565 aaKnown RBP8.56□□□□□ -1.04
TDP1-204ENST00000545686 SPRYD7Q5W111 196 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 OR2T5Q6IEZ7 315 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 TSPYL5Q86VY4 417 aaPredicted RBP8.56□□□□□ -1.04
TDP1-204ENST00000545686 ARMC8Q8IUR7 673 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 OR2T29Q8NH02 315 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 NETO1Q8TDF5 533 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 HPS1Q92902 700 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 USP7Q93009 1102 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 MYEOVQ96EZ4 313 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 DACH2Q96NX9 599 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 SIGLEC11Q96RL6 698 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 PITX2Q99697 317 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 DSN1Q9H410 356 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 ZNF408Q9H9D4 720 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 SARS2Q9NP81 518 aaKnown RBP8.56□□□□□ -1.04
TDP1-204ENST00000545686 OPTCQ9UBM4 332 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 EVLQ9UI08 416 aaPredicted RBP8.56□□□□□ -1.04
TDP1-204ENST00000545686 AGO1Q9UL18 857 aaKnown RBP8.56□□□□□ -1.04
TDP1-204ENST00000545686 NDRG4Q9ULP0 352 aaKnown RBP8.56□□□□□ -1.04
TDP1-204ENST00000545686 ZNF232Q9UNY5 417 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 PKP3Q9Y446 797 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 RAI2Q9Y5P3 530 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 GMPPBQ9Y5P6 360 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 MN1Q10571 1320 aaPredicted RBP8.56□□□□□ -1.04
TDP1-204ENST00000545686 H0Y626 953 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 TAPBPO15533 448 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 ULK1O75385 1050 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 UPK1BO75841 260 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 TRIM16O95361 564 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 MT-ND2P03891 347 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 HMBSP08397 361 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 PABPC1P11940 636 aaKnown RBP8.55□□□□□ -1.04
TDP1-204ENST00000545686 FPR1P21462 350 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 PSMB9P28065 219 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 CD52P31358 61 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 FMO3P31513 532 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 DNAJA1P31689 397 aaKnown RBP8.55□□□□□ -1.04
TDP1-204ENST00000545686 GRK4P32298 578 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 HSPA7P48741 367 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 CLDN8P56748 225 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 MAD2L1BPQ15013 274 aaPredicted RBP8.55□□□□□ -1.04
TDP1-204ENST00000545686 PROX2Q3B8N5 592 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 VARS2Q5ST30 1063 aaKnown RBP8.55□□□□□ -1.04
TDP1-204ENST00000545686 UBE2UQ5VVX9 321 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 CES5AQ6NT32 575 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 TTC23LQ6PF05 361 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 DNAJC14Q6Y2X3 702 aaPredicted RBP8.55□□□□□ -1.04
TDP1-204ENST00000545686 ZNF598Q86UK7 904 aaKnown RBP8.55□□□□□ -1.04
TDP1-204ENST00000545686 CYP4Z1Q86W10 505 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 PLD3Q8IV08 490 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 OR7D4Q8NG98 312 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 NUDT8Q8WV74 236 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 TXNDC15Q96J42 360 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 C19orf43Q9BQ61 176 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 CD244Q9BZW8 370 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.55□□□□□ -1.04
TDP1-204ENST00000545686 KLHL25Q9H0H3 589 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 TNKS2Q9H2K2 1166 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 MMP27Q9H306 513 aa8.55□□□□□ -1.04
TDP1-204ENST00000545686 RIBC2Q9H4K1 309 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms