RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 MED24O75448 989 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 PRF1P14222 555 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 MPZP25189 248 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 ZNF75DP51815 510 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 NUDT6P53370 316 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 SEC61BP60468 96 aaKnown RBP3.95□□□□□ -1.78
SNHG1-222ENST00000545308 UBXN1Q04323 297 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 PPATQ06203 517 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 GPS2Q13227 327 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 RRS1Q15050 365 aaKnown RBP3.95□□□□□ -1.78
SNHG1-222ENST00000545308 RBMS2Q15434 407 aaKnown RBP3.95□□□□□ -1.78
SNHG1-222ENST00000545308 TRIP6Q15654 476 aaKnown RBP3.95□□□□□ -1.78
SNHG1-222ENST00000545308 PKN2Q16513 984 aaKnown RBP3.95□□□□□ -1.78
SNHG1-222ENST00000545308 ANKRD20A4Q4UJ75 823 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 ANKRD20A8PQ5CZ79 823 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 ANKRD20A2Q5SQ80 823 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 FNBP1LQ5T0N5 605 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 ANKRD20A1Q5TYW2 823 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 ANKRD20A3Q5VUR7 823 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 TYW3Q6IPR3 259 aaKnown RBP3.95□□□□□ -1.78
SNHG1-222ENST00000545308 WDR73Q6P4I2 378 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 SHC4Q6S5L8 630 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 GBP6Q6ZN66 633 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 RAPH1Q70E73 1250 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 Q75L30 129 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 DET1Q7L5Y6 550 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 ZNF34Q8IZ26 560 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 SYCP3Q8IZU3 236 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 SLC5A8Q8N695 610 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 ARFGAP1Q8N6T3 406 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 KRT35Q92764 455 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 EXOC4Q96A65 974 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 OTUB1Q96FW1 271 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-222ENST00000545308 ABHD8Q96I13 439 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 FAM81BQ96LP2 452 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 ZNF582Q96NG8 517 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-222ENST00000545308 TMEM79Q9BSE2 394 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 SEMA6AQ9H2E6 1030 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 TRNAU1APQ9NX07 287 aaKnown RBP3.95□□□□□ -1.78
SNHG1-222ENST00000545308 OSER1Q9NX31 292 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 IL36RNQ9UBH0 155 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 KNSTRNQ9Y448 316 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 LOXL2Q9Y4K0 774 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 HS3ST3B1Q9Y662 390 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 NFS1Q9Y697 457 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 PDE4DIPQ5VU43 2346 aa3.95□□□□□ -1.78
SNHG1-222ENST00000545308 ATXN2Q99700 1313 aaKnown RBP3.95□□□□□ -1.78
SNHG1-222ENST00000545308 CENPJQ9HC77 1338 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-222ENST00000545308 N4BP2Q86UW6 1770 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-222ENST00000545308 C5P01031 1676 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 DICER1Q9UPY3 1922 aaKnown RBP3.94□□□□□ -1.78
SNHG1-222ENST00000545308 PRSS51A0A1B0GVH4 220 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 A0A1B0GVT2 93 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 VWA5AO00534 786 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 PPEF2O14830 753 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 KINO60870 393 aaKnown RBP3.94□□□□□ -1.78
SNHG1-222ENST00000545308 WISP2O76076 250 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 NTN1O95631 604 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 CH25HO95992 272 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 MT-ND3P03897 115 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 RAB40ALP0C0E4 278 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 OR2T7P0C7T2 308 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 RFC4P35249 363 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 ATP6V1E1P36543 226 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 MTHFRP42898 656 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 KCNJ1P48048 391 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 ENTPD1P49961 510 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 LBX1P52954 281 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 BRWD1-AS2P59051 145 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 PTENP60484 403 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 POLR2LP62875 67 aaKnown RBP3.94□□□□□ -1.78
SNHG1-222ENST00000545308 ACTN3Q08043 901 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-222ENST00000545308 GAGE2BQ13066 116 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 FHL1Q13642 323 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 ITGA7Q13683 1181 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 NR1D2Q14995 579 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 SMU1Q2TAY7 513 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 DEFB115Q30KQ5 88 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 GAGE2EQ4V326 116 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 FSCBQ5H9T9 825 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 GLRA4Q5JXX5 417 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 DNTTIP2Q5QJE6 756 aaKnown RBP3.94□□□□□ -1.78
SNHG1-222ENST00000545308 FAM109BQ6ICB4 259 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-222ENST00000545308 GAGE2AQ6NT46 116 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 RGMBQ6NW40 437 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 ALKBH5Q6P6C2 394 aaKnown RBP3.94□□□□□ -1.78
SNHG1-222ENST00000545308 MOXD1Q6UVY6 613 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 TLK2Q86UE8 772 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 GPR180Q86V85 440 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 HOOK3Q86VS8 718 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 ANKRD13CQ8N6S4 541 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 NHLRC2Q8NBF2 726 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 SPC24Q8NBT2 197 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 ATAD1Q8NBU5 361 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 PAPD5Q8NDF8 572 aaKnown RBP3.94□□□□□ -1.78
SNHG1-222ENST00000545308 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-222ENST00000545308 ATL1Q8WXF7 558 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 ST6GALNAC6Q969X2 333 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 SLAMF9Q96A28 289 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 SLC25A28Q96A46 364 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms