RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 OR52E1Q8NGJ3 308 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 LCN9Q8WX39 176 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 XPR1Q9UBH6 696 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 FTSJ1Q9UET6 329 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 PRAMEF33A0A0G2JMD5 474 aa22.45■■□□□ 1.18
HOMER3-205ENST00000542541 SH3BP5O60239 455 aa22.45■■□□□ 1.18
HOMER3-205ENST00000542541 S100BP04271 92 aaPredicted RBP22.45■■□□□ 1.18
HOMER3-205ENST00000542541 ANXA5P08758 320 aa22.45■■□□□ 1.18
HOMER3-205ENST00000542541 CREB1P16220 341 aa22.45■■□□□ 1.18
HOMER3-205ENST00000542541 PNLIPP16233 465 aa22.45■■□□□ 1.18
HOMER3-205ENST00000542541 CDHR3Q6ZTQ4 885 aa22.45■■□□□ 1.18
HOMER3-205ENST00000542541 ATL1Q8WXF7 558 aa22.45■■□□□ 1.18
HOMER3-205ENST00000542541 CNDP2Q96KP4 475 aaKnown RBP22.45■■□□□ 1.18
HOMER3-205ENST00000542541 ATOH8Q96SQ7 321 aa22.45■■□□□ 1.18
HOMER3-205ENST00000542541 PKP4Q99569 1192 aa22.45■■□□□ 1.18
HOMER3-205ENST00000542541 CDC6Q99741 560 aa22.45■■□□□ 1.18
HOMER3-205ENST00000542541 KCNK9Q9NPC2 374 aa22.45■■□□□ 1.18
HOMER3-205ENST00000542541 CD274Q9NZQ7 290 aa22.45■■□□□ 1.18
HOMER3-205ENST00000542541 SPATA7Q9P0W8 599 aa22.45■■□□□ 1.18
HOMER3-205ENST00000542541 TMCO1Q9UM00 188 aa22.45■■□□□ 1.18
HOMER3-205ENST00000542541 PLLPQ9Y342 182 aa22.45■■□□□ 1.18
HOMER3-205ENST00000542541 RNF215Q9Y6U7 377 aa22.45■■□□□ 1.18
HOMER3-205ENST00000542541 EME2A4GXA9 379 aaPredicted RBP22.44■■□□□ 1.18
HOMER3-205ENST00000542541 ZNF839A8K0R7 811 aa22.44■■□□□ 1.18
HOMER3-205ENST00000542541 TYROBPO43914 113 aa22.44■■□□□ 1.18
HOMER3-205ENST00000542541 SHMT2P34897 504 aa22.44■■□□□ 1.18
HOMER3-205ENST00000542541 GPR3P46089 330 aa22.44■■□□□ 1.18
HOMER3-205ENST00000542541 KCNC1P48547 511 aa22.44■■□□□ 1.18
HOMER3-205ENST00000542541 ARHGAP19Q14CB8 494 aa22.44■■□□□ 1.18
HOMER3-205ENST00000542541 CCSMST1Q4G0I0 132 aa22.44■■□□□ 1.18
HOMER3-205ENST00000542541 ZNF438Q7Z4V0 828 aa22.44■■□□□ 1.18
HOMER3-205ENST00000542541 EGFL8Q99944 293 aa22.44■■□□□ 1.18
HOMER3-205ENST00000542541 MED4Q9NPJ6 270 aa22.44■■□□□ 1.18
HOMER3-205ENST00000542541 CPSF2Q9P2I0 782 aaKnown RBP22.44■■□□□ 1.18
HOMER3-205ENST00000542541 FAM186AA6NE01 2351 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 CPED1A4D0V7 1026 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 LILRA5A6NI73 299 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 SUPT3HB4E1H0 165 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 SUPT3HO75486 399 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 GUCA1CO95843 209 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 TPBGLP0DKB5 382 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 CKMT2P17540 419 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 TAC1P20366 129 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 HNMTP50135 292 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 RAB28P51157 221 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 GRB7Q14451 532 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 TTMPQ5BVD1 217 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 C16orf46Q6P387 395 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 KLHL35Q6PF15 583 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 TCP10LQ8TDR4 215 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 SRMSQ9H3Y6 488 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 NUDT4Q9NZJ9 180 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 MID2Q9UJV3 735 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 ARID1BQ8NFD5 2236 aaPredicted RBP22.43■■□□□ 1.18
HOMER3-205ENST00000542541 GVINP1Q7Z2Y8 2422 aa22.43■■□□□ 1.18
HOMER3-205ENST00000542541 LY6G6EA0A0G2JKS1 128 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 FAM221BA6H8Z2 402 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 PRPF4O43172 522 aaKnown RBP eCLIP22.42■■□□□ 1.18
HOMER3-205ENST00000542541 SMIM24O75264 130 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 EPHA4P54764 986 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 ANKS6Q68DC2 871 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 AMIGO1Q86WK6 493 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 TCAIMQ8N3R3 496 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 OR4E2Q8NGC2 313 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 NETO1Q8TDF5 533 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 EXT2Q93063 718 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 OR6C2Q9NZP2 312 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 U3KQA8 63 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 TK2O00142 265 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 TM9SF1O15321 606 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 PLIN3O60664 434 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 SLC16A8O95907 504 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 PROCP04070 461 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 MYF5P13349 255 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 NR1D2Q14995 579 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 SULT1C3Q6IMI6 304 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 KIAA2013Q8IYS2 634 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 TMEM151AQ8N4L1 468 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 CCDC63Q8NA47 563 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 RDH11Q8TC12 318 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 FBXL8Q96CD0 374 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 EPB41L1Q9H4G0 881 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 KCNK4Q9NYG8 393 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 CIDEBQ9UHD4 219 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 EMCNQ9ULC0 261 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 PLAGL1Q9UM63 463 aa22.42■■□□□ 1.18
HOMER3-205ENST00000542541 NCF1BA6NI72 391 aaPredicted RBP22.41■■□□□ 1.18
HOMER3-205ENST00000542541 NCF1CA8MVU1 366 aaPredicted RBP22.41■■□□□ 1.18
HOMER3-205ENST00000542541 CBFA2T3O75081 653 aa22.41■■□□□ 1.18
HOMER3-205ENST00000542541 ZWINTO95229 277 aa22.41■■□□□ 1.18
HOMER3-205ENST00000542541 GFAPP14136 432 aa22.41■■□□□ 1.18
HOMER3-205ENST00000542541 NCF1P14598 390 aaPredicted RBP22.41■■□□□ 1.18
HOMER3-205ENST00000542541 ALDH4A1P30038 563 aa22.41■■□□□ 1.18
HOMER3-205ENST00000542541 RPA3P35244 121 aaPredicted RBP22.41■■□□□ 1.18
HOMER3-205ENST00000542541 SLC18A1P54219 525 aa22.41■■□□□ 1.18
HOMER3-205ENST00000542541 CYP2A13Q16696 494 aa22.41■■□□□ 1.18
HOMER3-205ENST00000542541 GUSBP11Q6P575 273 aa22.41■■□□□ 1.18
HOMER3-205ENST00000542541 EFL1Q7Z2Z2 1120 aaKnown RBP22.41■■□□□ 1.18
HOMER3-205ENST00000542541 SYTL1Q8IYJ3 562 aa22.41■■□□□ 1.18
HOMER3-205ENST00000542541 PDPRQ8NCN5 879 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms