RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 DNAJC7Q99615 494 aa7.03□□□□□ -1.28
YBX3-209ENST00000540747 COPS8Q99627 209 aa7.03□□□□□ -1.28
YBX3-209ENST00000540747 HGH1Q9BTY7 390 aa7.03□□□□□ -1.28
YBX3-209ENST00000540747 MENTQ9BUN1 341 aa7.03□□□□□ -1.28
YBX3-209ENST00000540747 FICDQ9BVA6 458 aa7.03□□□□□ -1.28
YBX3-209ENST00000540747 MAK16Q9BXY0 300 aaKnown RBP7.03□□□□□ -1.28
YBX3-209ENST00000540747 DEF6Q9H4E7 631 aa7.03□□□□□ -1.28
YBX3-209ENST00000540747 WDR54Q9H977 334 aa7.03□□□□□ -1.28
YBX3-209ENST00000540747 ARNT2Q9HBZ2 717 aa7.03□□□□□ -1.28
YBX3-209ENST00000540747 SPTLC3Q9NUV7 552 aa7.03□□□□□ -1.28
YBX3-209ENST00000540747 DDX56Q9NY93 547 aaKnown RBP7.03□□□□□ -1.28
YBX3-209ENST00000540747 ZDHHC3Q9NYG2 299 aa7.03□□□□□ -1.28
YBX3-209ENST00000540747 OR6C2Q9NZP2 312 aa7.03□□□□□ -1.28
YBX3-209ENST00000540747 KLHL8Q9P2G9 620 aaPredicted RBP7.03□□□□□ -1.28
YBX3-209ENST00000540747 IFT80Q9P2H3 777 aaPredicted RBP7.03□□□□□ -1.28
YBX3-209ENST00000540747 TRHDEQ9UKU6 1024 aa7.03□□□□□ -1.28
YBX3-209ENST00000540747 KLF2Q9Y5W3 355 aaPredicted RBP7.03□□□□□ -1.28
YBX3-209ENST00000540747 NIPBLQ6KC79 2804 aaeCLIP7.03□□□□□ -1.28
YBX3-209ENST00000540747 MYO7BQ6PIF6 2116 aa7.03□□□□□ -1.28
YBX3-209ENST00000540747 SPG11Q96JI7 2443 aa7.02□□□□□ -1.28
YBX3-209ENST00000540747 A0A0J9YY10 115 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 A0A1W2PQ72 361 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 CCDC78A2IDD5 438 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 HEATR9A2RTY3 570 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 VSTM2BA6NLU5 285 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 C2orf81A6NN90 581 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 HACD1B0YJ81 288 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 H7C0S8 307 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 IFRD1O00458 451 aaPredicted RBP7.02□□□□□ -1.29
YBX3-209ENST00000540747 CCL22O00626 93 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 PCDH17O14917 1159 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 ALOX12BO75342 701 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 SERPINC1P01008 464 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 ALBP02768 609 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 PRSS56P0CW18 603 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 RALBP11234 206 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 ITGALP20701 1170 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 ACRV1P26436 265 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 SHMT2P34897 504 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 SOX11P35716 441 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 SLC1A1P43005 524 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 CDKN1CP49918 316 aaPredicted RBP7.02□□□□□ -1.29
YBX3-209ENST00000540747 GEMP55040 296 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 PRKG2Q13237 762 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 ART3Q13508 389 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 KRT33BQ14525 404 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 ZNF169Q14929 603 aaPredicted RBP7.02□□□□□ -1.29
YBX3-209ENST00000540747 SLC9A5Q14940 896 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 NKG7Q16617 165 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 CYP2A13Q16696 494 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 SLC5A12Q1EHB4 618 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 GPR33Q49SQ1 333 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 BBS12Q6ZW61 710 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 OVCH1Q7RTY7 1134 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 PID1Q7Z2X4 250 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 MTERF4Q7Z6M4 381 aaKnown RBP7.02□□□□□ -1.29
YBX3-209ENST00000540747 RHOT2Q8IXI1 618 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 PIANPQ8IYJ0 282 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 ZNF655Q8N720 491 aaPredicted RBP7.02□□□□□ -1.29
YBX3-209ENST00000540747 OR11G2Q8NGC1 345 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 OR5AR1Q8NGP9 310 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 ITLN2Q8WWU7 325 aaPredicted RBP7.02□□□□□ -1.29
YBX3-209ENST00000540747 MOCOSQ96EN8 888 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 DCUN1D1Q96GG9 259 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 TAAR6Q96RI8 345 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 MESP1Q9BRJ9 268 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 FSD1LQ9BXM9 530 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 SLC7A5P2Q9GIP4 190 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 FAM96AQ9H5X1 160 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 EURLQ9NYK6 297 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 NDOR1Q9UHB4 597 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 RSPH14Q9UHP6 348 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 GPN3Q9UHW5 284 aaPredicted RBP7.02□□□□□ -1.29
YBX3-209ENST00000540747 CRLS1Q9UJA2 301 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 PLCL2Q9UPR0 1127 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 HYOU1Q9Y4L1 999 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 NAV3Q8IVL0 2385 aa7.02□□□□□ -1.29
YBX3-209ENST00000540747 A0A1B0GUH1 482 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 A0A1B0GX78 115 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 SLC5A10A0PJK1 596 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 FITM1A5D6W6 292 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 BHMG1C9JSJ3 638 aaPredicted RBP7.01□□□□□ -1.29
YBX3-209ENST00000540747 CFAP99D6REC4 459 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 PRSS44E7EML9 344 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 LIN7AO14910 233 aaPredicted RBP7.01□□□□□ -1.29
YBX3-209ENST00000540747 MAP3K7O43318 606 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 PSTPIP1O43586 416 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 ANXA9O76027 345 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 KLHL18O94889 574 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 AP2A2O94973 939 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 COMTP21964 271 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 PKLRP30613 574 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 PTGER4P35408 488 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 MARCKSL1P49006 195 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 HADHBP55084 474 aaKnown RBP7.01□□□□□ -1.29
YBX3-209ENST00000540747 UBASH3AP57075 661 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 MFAP5Q13361 173 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 GRB7Q14451 532 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 KIR2DS3Q14952 304 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 TLR1Q15399 786 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms