RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 PRKG2Q13237 762 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 GPR18Q14330 331 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 NR1D2Q14995 579 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 TTLL9Q3SXZ7 439 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 UGT3A1Q6NUS8 523 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 SLC9B2Q86UD5 537 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 IQCKQ8N0W5 287 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 CFAP61Q8NHU2 1237 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 IFI44Q8TCB0 444 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 ZIM3Q96PE6 472 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 FERD3LQ96RJ6 166 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 HGH1Q9BTY7 390 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 MENTQ9BUN1 341 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 POPDC3Q9HBV1 291 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 GPAMQ9HCL2 828 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 TBK1Q9UHD2 729 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 PLAGL1Q9UM63 463 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 ASF1AQ9Y294 204 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 ARHGEF33A8MVX0 844 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 IFRD1O00458 451 aaPredicted RBP16.22■□□□□ 0.19
UBC-208ENST00000540700 B4GAT1O43505 415 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 NUDT21O43809 227 aaKnown RBP16.22■□□□□ 0.19
UBC-208ENST00000540700 PSIP1O75475 530 aaKnown RBP16.22■□□□□ 0.19
UBC-208ENST00000540700 WISP1O95388 367 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 C1orf105O95561 183 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 VIPP01282 170 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 C2P06681 752 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 CBSLP0DN79 551 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 SLC2A4P14672 509 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 STMN1P16949 149 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 CBSP35520 551 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 OR1D5P58170 312 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 ZNF844Q08AG5 666 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 TMEM26Q6ZUK4 368 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 NEK10Q6ZWH5 1172 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 CENPLQ8N0S6 344 aaPredicted RBP16.22■□□□□ 0.19
UBC-208ENST00000540700 PLD6Q8N2A8 252 aaKnown RBP16.22■□□□□ 0.19
UBC-208ENST00000540700 OR5K2Q8NHB8 316 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 ASB11Q8WXH4 323 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 TTC9Q92623 222 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 CXorf40BQ96DE9 158 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 IGSF5Q9NSI5 407 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 OGFRQ9NZT2 677 aa16.22■□□□□ 0.19
UBC-208ENST00000540700 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.22■□□□□ 0.19
UBC-208ENST00000540700 UQCRHLA0A096LP55 91 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 A0A1W2PPM1 405 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 GFYI3L273 518 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 EIF3FO00303 357 aaPredicted RBP16.21■□□□□ 0.19
UBC-208ENST00000540700 CDC7O00311 574 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 ERLIN1O75477 346 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 KRT38O76015 456 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 UQCRHP07919 91 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 SNRPAP09012 282 aaKnown RBP16.21■□□□□ 0.19
UBC-208ENST00000540700 ENO3P13929 434 aaPredicted RBP16.21■□□□□ 0.19
UBC-208ENST00000540700 SERPINB8P50452 374 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 IL2P60568 153 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 VAC14Q08AM6 782 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 ILF2Q12905 390 aaKnown RBP16.21■□□□□ 0.19
UBC-208ENST00000540700 NKAIN2Q5VXU1 208 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 KIAA1614Q5VZ46 1190 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 TIFABQ6ZNK6 161 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 PRICKLE2Q7Z3G6 844 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 TRIM48Q8IWZ4 208 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 LSMEM2Q8N112 164 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 Q8N9G6 341 aaPredicted RBP16.21■□□□□ 0.19
UBC-208ENST00000540700 OR52E1Q8NGJ3 308 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 SKA2Q8WVK7 121 aaPredicted RBP16.21■□□□□ 0.19
UBC-208ENST00000540700 TSPAN17Q96FV3 270 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 PDLIM5Q96HC4 596 aaKnown RBP16.21■□□□□ 0.19
UBC-208ENST00000540700 UBXN10Q96LJ8 280 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 CCDC3Q9BQI4 270 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 KIR3DX1Q9H7L2 352 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 ZNF358Q9NW07 568 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 IKBKGQ9Y6K9 419 aa16.21■□□□□ 0.19
UBC-208ENST00000540700 COL27A1Q8IZC6 1860 aaPredicted RBP16.2■□□□□ 0.18
UBC-208ENST00000540700 A0A096LPK6 155 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 A0A1W2PQM1 296 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 NPEPPSL1A6NEC2 478 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 OPA1O60313 960 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 CSO75390 466 aaKnown RBP16.2■□□□□ 0.18
UBC-208ENST00000540700 CCDC166P0CW27 439 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 CD1DP15813 335 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 CNTFP26441 200 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 RPIAP49247 311 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 SLC12A2P55011 1212 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 RASA2Q15283 850 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 PHKG1Q16816 387 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 SBSNQ6UWP8 590 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 UNC5DQ6UXZ4 953 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 SH2D5Q6ZV89 423 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 TMPRSS9Q7Z410 1059 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 SPRED1Q7Z699 444 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 TBC1D21Q8IYX1 336 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 DENND1AQ8TEH3 1009 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 KCTD4Q8WVF5 259 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 PTERQ96BW5 349 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 MED8Q96G25 268 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 GPR78Q96P69 363 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 IL17FQ96PD4 163 aa16.2■□□□□ 0.18
UBC-208ENST00000540700 DEPDC7Q96QD5 511 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms