RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 EID2BQ96D98 161 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 CDK5RAP1Q96SZ6 601 aaKnown RBP12.02□□□□□ -0.48
NPC1-202ENST00000540608 ZIC5Q96T25 663 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 NTMT1Q9BV86 223 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 CLPBQ9H078 707 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 KCNH6Q9H252 994 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 SLC6A13Q9NSD5 602 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 EXD2Q9NVH0 621 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 C1orf109Q9NX04 203 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 HCSTQ9UBK5 93 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 KLQ9UEF7 1012 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 TRPS1Q9UHF7 1281 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 DAPK2Q9UIK4 370 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 KRBA1A5PL33 1030 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 AREL1O15033 823 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 SLC22A1O15245 554 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 ANGPTL1O95841 491 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 EBLN1P0CF75 366 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 PRKAR2AP13861 404 aaKnown RBP12.02□□□□□ -0.49
NPC1-202ENST00000540608 DGKAP23743 735 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 HMGCLP35914 325 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 FAM189BP81408 668 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 IL5RAQ01344 420 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 RAPSNQ13702 412 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 SGO1Q5FBB7 561 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 LRIF1Q5T3J3 769 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 SETD9Q8NE22 299 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 OR7A2PQ8NGA2 310 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 CNIH3Q8TBE1 160 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 MCOLN3Q8TDD5 553 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 RORBQ92753 470 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 TBC1D20Q96BZ9 403 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 FAM120BQ96EK7 910 aaKnown RBP12.02□□□□□ -0.49
NPC1-202ENST00000540608 EGFL8Q99944 293 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 CPPED1Q9BRF8 314 aaPredicted RBP12.02□□□□□ -0.49
NPC1-202ENST00000540608 NECTIN3Q9NQS3 549 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 ATAD3AQ9NVI7 634 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 GIN1Q9NXP7 522 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 HECAQ9UBI9 543 aaPredicted RBP12.02□□□□□ -0.49
NPC1-202ENST00000540608 FBXO10Q9UK96 956 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 INTS6Q9UL03 887 aaKnown RBP12.02□□□□□ -0.49
NPC1-202ENST00000540608 U3KQV3 271 aa12.02□□□□□ -0.49
NPC1-202ENST00000540608 A0A096LPI6 279 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 SLC38A8A6NNN8 435 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 MANBAO00462 879 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 AXIN1O15169 862 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 XPNPEP2O43895 674 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 TSPAN3O60637 253 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 CD160O95971 181 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 ALDH2P05091 517 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 BCKDHAP12694 445 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 JUNDP17535 347 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 GGT5P36269 586 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 SGSHP51688 502 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 RPS3AP61247 264 aaKnown RBP12.01□□□□□ -0.49
NPC1-202ENST00000540608 PHC1P78364 1004 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 ARF5P84085 180 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 DUSP4Q13115 394 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 RNF219Q5W0B1 726 aaPredicted RBP12.01□□□□□ -0.49
NPC1-202ENST00000540608 CPZQ66K79 652 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 METTL2BQ6P1Q9 378 aaKnown RBP12.01□□□□□ -0.49
NPC1-202ENST00000540608 CHST9Q7L1S5 443 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 SERPINA9Q86WD7 417 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 HOMEZQ8IX15 550 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 MINDY2Q8NBR6 621 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 USP7Q93009 1102 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 CCDC97Q96F63 343 aaPredicted RBP12.01□□□□□ -0.49
NPC1-202ENST00000540608 ZNF641Q96N77 438 aaPredicted RBP12.01□□□□□ -0.49
NPC1-202ENST00000540608 GPR63Q9BZJ6 419 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 DUSP21Q9H596 190 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 WWOXQ9NZC7 414 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 ERVK-18Q9QC07 812 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 MAN2B2Q9Y2E5 1009 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 WDR37Q9Y2I8 494 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 PCDHGA4Q9Y5G9 962 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 HSPE1-MOB4S4R3N1 261 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 LOC730098B7Z3J9 87 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 ARVCFO00192 962 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 FZD6O60353 706 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 COQ9O75208 318 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 ARHGEF15O94989 841 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 PRAMEF12O95522 483 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 FTH1P02794 183 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 SLC10A3P09131 477 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 ITGB6P18564 788 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 CST5P28325 142 aaPredicted RBP12.01□□□□□ -0.49
NPC1-202ENST00000540608 CD6P30203 668 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 HPCAL1P37235 193 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 MAGEA2P43356 314 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 CXCR4P61073 352 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 ADPRMQ3LIE5 342 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 NCCRP1Q6ZVX7 275 aaPredicted RBP12.01□□□□□ -0.49
NPC1-202ENST00000540608 C10orf111Q8N326 155 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 UBTD2Q8WUN7 234 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 YIPF6Q96EC8 236 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 REXO5Q96IC2 774 aaKnown RBP12.01□□□□□ -0.49
NPC1-202ENST00000540608 GABARAPL1Q9H0R8 117 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 TNKS2Q9H2K2 1166 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 SERHLQ9NQF3 203 aa12.01□□□□□ -0.49
NPC1-202ENST00000540608 TPRKBQ9Y3C4 175 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms