RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 FSHRP23945 695 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 ALDH7A1P49419 539 aaKnown RBP11.69□□□□□ -0.54
CPNE8-203ENST00000538596 BMXP51813 675 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 SPIDRQ14159 915 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 CBX2Q14781 532 aaPredicted RBP11.69□□□□□ -0.54
CPNE8-203ENST00000538596 C6orf141Q5SZD1 244 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 ZNF551Q7Z340 670 aaPredicted RBP11.69□□□□□ -0.54
CPNE8-203ENST00000538596 TRIM46Q7Z4K8 759 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 GALNT5Q7Z7M9 940 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 MICU2Q8IYU8 434 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 CRIPAKQ8N1N5 446 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 AUTS2Q8WXX7 1259 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 CAPNS2Q96L46 248 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 SERHLQ9NQF3 203 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 GMEB1Q9Y692 573 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 SLC28A1O00337 649 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 GREM1O60565 184 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 STK16O75716 305 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 INHBBP09529 407 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 MSH3P20585 1137 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 DCTP40126 519 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 VAC14Q08AM6 782 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 PGS1Q32NB8 556 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 TPGS1Q6ZTW0 290 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 CNIH3Q8TBE1 160 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 SKA2Q8WVK7 121 aaPredicted RBP11.68□□□□□ -0.54
CPNE8-203ENST00000538596 DCAF13Q9NV06 445 aaKnown RBP11.68□□□□□ -0.54
CPNE8-203ENST00000538596 PAK1IP1Q9NWT1 392 aaPredicted RBP11.68□□□□□ -0.54
CPNE8-203ENST00000538596 C1orf109Q9NX04 203 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 ARL15Q9NXU5 204 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 GPRC5BQ9NZH0 403 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 DGKBQ9Y6T7 804 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 TRBV5-3A0A0A0MS03 114 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 TRIM64BA6NI03 449 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 NOL3O60936 208 aaKnown RBP11.68□□□□□ -0.54
CPNE8-203ENST00000538596 MYCP01106 439 aaPredicted RBP11.68□□□□□ -0.54
CPNE8-203ENST00000538596 HNRNPCP07910 306 aaKnown RBP eCLIP11.68□□□□□ -0.54
CPNE8-203ENST00000538596 STK19P49842 368 aaPredicted RBP11.68□□□□□ -0.54
CPNE8-203ENST00000538596 GRSF1Q12849 480 aaKnown RBP eCLIP11.68□□□□□ -0.54
CPNE8-203ENST00000538596 CES5AQ6NT32 575 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 Q6ZNX1 250 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 DNAJB7Q7Z6W7 309 aaPredicted RBP11.68□□□□□ -0.54
CPNE8-203ENST00000538596 CROCCP3Q8IVE0 287 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 ZNF555Q8NEP9 628 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 ZNF461Q8TAF7 563 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 PNPT1Q8TCS8 783 aaKnown RBP11.68□□□□□ -0.54
CPNE8-203ENST00000538596 CD99L2Q8TCZ2 262 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 OVCA2Q8WZ82 227 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 USP7Q93009 1102 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 TUBA1CQ9BQE3 449 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 NTMT1Q9BV86 223 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 PARVBQ9HBI1 364 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 DNMT3BQ9UBC3 853 aaKnown RBP11.68□□□□□ -0.54
CPNE8-203ENST00000538596 WARS2Q9UGM6 360 aaKnown RBP11.68□□□□□ -0.54
CPNE8-203ENST00000538596 PPT2Q9UMR5 302 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 PDE10AQ9Y233 779 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 SCN8AQ9UQD0 1980 aa11.68□□□□□ -0.54
CPNE8-203ENST00000538596 TRBV5-4A0A0C4DH59 114 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 XPNPEP2O43895 674 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 ZNF821O75541 412 aaPredicted RBP11.67□□□□□ -0.54
CPNE8-203ENST00000538596 DIRAS1O95057 198 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 ZBTB11O95625 1053 aaPredicted RBP11.67□□□□□ -0.54
CPNE8-203ENST00000538596 EBLN1P0CF75 366 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 CYP4B1P13584 511 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 CCR7P32248 378 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 CTSOP43234 321 aaPredicted RBP11.67□□□□□ -0.54
CPNE8-203ENST00000538596 RPIAP49247 311 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 AP1S1P61966 158 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 RPS14P62263 151 aaKnown RBP11.67□□□□□ -0.54
CPNE8-203ENST00000538596 B4GALNT1Q00973 533 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 AQP6Q13520 282 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 DGKKQ5KSL6 1271 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 TTC23Q5W5X9 447 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 LHX8Q68G74 356 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 GTF2IRD2BQ6EKJ0 949 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 TMCO2Q7Z6W1 182 aaPredicted RBP11.67□□□□□ -0.54
CPNE8-203ENST00000538596 GPR149Q86SP6 731 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 GTF2IRD2Q86UP8 949 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 NXPE1Q8N323 547 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 SLC15A4Q8N697 577 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 SMYD1Q8NB12 490 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 SLC43A3Q8NBI5 491 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 FAM120BQ96EK7 910 aaKnown RBP11.67□□□□□ -0.54
CPNE8-203ENST00000538596 PLEKHA8Q96JA3 519 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 CCDC90BQ9GZT6 254 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 ZNF334Q9HCZ1 680 aaPredicted RBP11.67□□□□□ -0.54
CPNE8-203ENST00000538596 PCDH10Q9P2E7 1040 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 CPQQ9Y646 472 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 MYOFQ9NZM1 2061 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 LOC100130705A0A1B0GUX0 176 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 INMTO95050 263 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 CLDN9O95484 217 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 HPRP00739 348 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 JUNBP17275 347 aaPredicted RBP11.67□□□□□ -0.54
CPNE8-203ENST00000538596 GZMMP51124 257 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 CCL23P55773 120 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 C21orf59P57076 290 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 ISL1P61371 349 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 IL1RL1Q01638 556 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 HSPA14Q0VDF9 509 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms