RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 TRAF7Q6Q0C0 670 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 ABI1Q8IZP0 508 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 ELMOD1Q8N336 334 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 ZNF513Q8N8E2 541 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-218ENST00000537641 DCBLD1Q8N8Z6 715 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 IPCEF1Q8WWN9 437 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-218ENST00000537641 HPS1Q92902 700 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 FAM120BQ96EK7 910 aaKnown RBP11.89□□□□□ -0.51
CPSF7-218ENST00000537641 HHIPL1Q96JK4 782 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 SLX1AQ9BQ83 275 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 P2RY12Q9H244 342 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 KCNH6Q9H252 994 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 IKZF5Q9H5V7 419 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.89□□□□□ -0.51
CPSF7-218ENST00000537641 UBA2Q9UBT2 640 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-218ENST00000537641 FKBPLQ9UIM3 349 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 SAMD4AQ9UPU9 718 aaKnown RBP11.89□□□□□ -0.51
CPSF7-218ENST00000537641 PCDHB5Q9Y5E4 795 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 PMF1-BGLAPU3KQ54 211 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 A0A096LPI6 279 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 SAGE2PA6NJ88 616 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 SYN3O14994 580 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 FFAR2O15552 330 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 RGS10O43665 173 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 XPNPEP2O43895 674 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 ARHGEF15O94989 841 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 SEC24AO95486 1093 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 FTH1P02794 183 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 CNPP09543 421 aaKnown RBP11.89□□□□□ -0.51
CPSF7-218ENST00000537641 PFKLP17858 780 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 CR2P20023 1033 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 CD6P30203 668 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 SERPINB1P30740 379 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 UGT2B10P36537 528 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 EIF2DP41214 584 aaKnown RBP11.89□□□□□ -0.51
CPSF7-218ENST00000537641 OR1G1P47890 313 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 MASP1P48740 699 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 ARHGDIAP52565 204 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 CD300CQ08708 224 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 ABHD18Q0P651 414 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 MBTPS1Q14703 1052 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 SPANXN4Q5MJ08 99 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 CPZQ66K79 652 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 SBSNQ6UWP8 590 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 ARMC8Q8IUR7 673 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 PIANPQ8IYJ0 282 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 TMEM132CQ8N3T6 1108 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 LIX1Q8N485 282 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 KIAA1958Q8N8K9 716 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 UBTD2Q8WUN7 234 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 LINC01599Q8WXQ3 324 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 DACH2Q96NX9 599 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 FAM193BQ96PV7 902 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-218ENST00000537641 SLIRPQ9GZT3 109 aaKnown RBP11.89□□□□□ -0.51
CPSF7-218ENST00000537641 KLHL25Q9H0H3 589 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 DSN1Q9H410 356 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 IPPKQ9H8X2 491 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 TM9SF3Q9HD45 589 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 SCUBE2Q9NQ36 999 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 RNF186Q9NXI6 227 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 MARCH2Q9P0N8 246 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 OSGIN1Q9UJX0 560 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 TSC22D4Q9Y3Q8 395 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 OARD1Q9Y530 152 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 PCDHB14Q9Y5E9 798 aa11.89□□□□□ -0.51
CPSF7-218ENST00000537641 SLC12A8A0AV02 714 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 F5H5T6 163 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 TAF4O00268 1085 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 OR1I1O60431 355 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 MT-ND2P03891 347 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 PABPC1P11940 636 aaKnown RBP11.88□□□□□ -0.51
CPSF7-218ENST00000537641 COL6A1P12109 1028 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 EFNA1P20827 205 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-218ENST00000537641 PSMB9P28065 219 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 MAP2K4P45985 399 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 GNPDA1P46926 289 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 CLK3P49761 638 aaKnown RBP11.88□□□□□ -0.51
CPSF7-218ENST00000537641 CDKN1CP49918 316 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-218ENST00000537641 KPNA1P52294 538 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-218ENST00000537641 PLIN5Q00G26 463 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 CAP1Q01518 475 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 PTGR1Q14914 329 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 PHKG1Q16816 387 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 ZNF181Q2M3W8 571 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 PLEKHG6Q3KR16 790 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 ZRANB3Q5FWF4 1079 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 VARS2Q5ST30 1063 aaKnown RBP11.88□□□□□ -0.51
CPSF7-218ENST00000537641 KDM4DQ6B0I6 523 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 TRIM46Q7Z4K8 759 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 SLC22A16Q86VW1 577 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 ZDHHC21Q8IVQ6 265 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 FAM9CQ8IZT9 166 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 RHOXF1Q8NHV9 184 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 FCGR1BQ92637 280 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 FBXO32Q969P5 355 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 TXNDC15Q96J42 360 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 TBCDQ9BTW9 1192 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 HERC2P3Q9BVR0 1158 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 SLC29A3Q9BZD2 475 aa11.88□□□□□ -0.51
CPSF7-218ENST00000537641 NACA2Q9H009 215 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms