RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 FTCDO95954 541 aa18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 VARSP26640 1264 aaKnown RBP18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 DCDP81605 110 aaKnown RBP18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 KIF5AQ12840 1032 aa18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 C1orf189Q5VU69 101 aa18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 SLC6A19Q695T7 634 aa18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 MRGPREQ86SM8 312 aa18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 GAS2L3Q86XJ1 694 aa18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 TXLNBQ8N3L3 684 aa18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 RBMXL3Q8N7X1 1067 aaKnown RBP18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 PNPLA2Q96AD5 504 aa18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 FER1L6-AS2Q96M78 137 aa18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 AP1M1Q9BXS5 423 aa18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 IMPACTQ9P2X3 320 aa18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 PLAGL1Q9UM63 463 aa18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 SRPK3Q9UPE1 567 aa18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 PTRH2Q9Y3E5 179 aaKnown RBP18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 TCRBV7S2A1N4TA0A589 114 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 HEATR9A2RTY3 570 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 ISM1B1AKI9 464 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 ZSCAN9O15535 394 aaPredicted RBP18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 OR1I1O60431 355 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 STIP1P31948 543 aaKnown RBP18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 FOLR3P41439 243 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 RAPSNQ13702 412 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 KIR2DS3Q14952 304 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 KYNUQ16719 465 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 SLC5A12Q1EHB4 618 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 TLDC1Q6P9B6 456 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 AFTPHQ6ULP2 937 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 LURAP1LQ8IV03 231 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 ZNF655Q8N720 491 aaPredicted RBP18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 Q8NA96 180 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 OR13J1Q8NGT2 312 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 HDAC10Q969S8 669 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 GBP5Q96PP8 586 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 BAG1Q99933 345 aaPredicted RBP18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 TXLNGQ9NUQ3 528 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 IRAK4Q9NWZ3 460 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 C5AR2Q9P296 337 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 IFT80Q9P2H3 777 aaPredicted RBP18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 DHCR7Q9UBM7 475 aaKnown RBP18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 NDOR1Q9UHB4 597 aa18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 MDC1Q14676 2089 aaKnown RBP18.97■□□□□ 0.63
TNFRSF1B-204ENST00000536782 DOPEY1Q5JWR5 2465 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 PEX12O00623 359 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 GOT2P00505 430 aaKnown RBP18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 IGHEP01854 428 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 ATXN8OSP0DMR3 200 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 C4orf17Q53FE4 359 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 PRR30Q53SZ7 412 aaPredicted RBP18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 TSTD2Q5T7W7 516 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 VWA5B1Q5TIE3 1220 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 PPP1R21Q6ZMI0 780 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 DNAJC22Q8N4W6 341 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 CLEC1AQ8NC01 280 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 OR2Y1Q8NGV0 311 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 ATG4AQ8WYN0 398 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 NDC1Q9BTX1 674 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 SLC29A3Q9BZD2 475 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 ETNK1Q9HBU6 452 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 MAP10Q9P2G4 905 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 RIMKLBQ9ULI2 386 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 PLCL2Q9UPR0 1127 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 CDYLQ9Y232 598 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 CRYBG3Q68DQ2 2970 aa18.96■□□□□ 0.63
TNFRSF1B-204ENST00000536782 MYO9AB2RTY4 2548 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 TCP11X1B4DZS4 312 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 E7EVH7 732 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 SUN1O94901 812 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CTSBP07858 339 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 ADRA1DP25100 572 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 PEBP1P30086 187 aaKnown RBP18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 PPARGP37231 505 aaPredicted RBP18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 FDFT1P37268 417 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CSE1LP55060 971 aaKnown RBP18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 SLC9A5Q14940 896 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 DNAJC21Q5F1R6 531 aaKnown RBP18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 DCAF10Q5QP82 559 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 HIST2H2BCQ6DN03 193 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 SLC22A15Q8IZD6 547 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 OR4L1Q8NH43 312 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 SSC4DQ8WTU2 575 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 PTERQ96BW5 349 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 HES6Q96HZ4 224 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 RANBP9Q96S59 729 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 TSSK1BQ9BXA7 367 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 SLC2A6Q9UGQ3 507 aa18.95■□□□□ 0.62
TNFRSF1B-204ENST00000536782 KLHL41O60662 606 aa18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 IFNB1P01574 187 aa18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 RPN2P04844 631 aa18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 ALPPP05187 535 aa18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 PKLRP30613 574 aa18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 CCR7P32248 378 aa18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 RAB28P51157 221 aa18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 HSPA14Q0VDF9 509 aa18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 NKAIN1Q4KMZ8 207 aa18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 FASTKD1Q53R41 847 aaKnown RBP18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 MRPL14Q6P1L8 145 aaKnown RBP18.94■□□□□ 0.62
TNFRSF1B-204ENST00000536782 NLRP9Q7RTR0 991 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms