RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 TSC22D2O75157 780 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 IL1R2P27930 398 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 GKP32189 559 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 PTGIRP43119 386 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 ARL13AQ5H913 290 aaPredicted RBP11.08□□□□□ -0.64
PTPRK-221ENST00000532331 C14orf80Q86SX3 495 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 HIPK1Q86Z02 1210 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 ATOH1Q92858 354 aaPredicted RBP11.08□□□□□ -0.64
PTPRK-221ENST00000532331 CRISPLD1Q9H336 500 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 TMEM27Q9HBJ8 222 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 CCNB1IP1Q9NPC3 277 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 PNPLA3Q9NST1 481 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 WBP1LQ9NX94 342 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 AJAP1Q9UKB5 411 aaPredicted RBP11.08□□□□□ -0.64
PTPRK-221ENST00000532331 SNX7Q9UNH6 387 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 OR5K4A6NMS3 321 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 HAS3O00219 553 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 DUX1O43812 170 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 SHHQ15465 462 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 FGF13Q92913 245 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 AGAP2Q99490 1192 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 MUC13Q9H3R2 512 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 LGALS13Q9UHV8 139 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 HCFC2Q9Y5Z7 792 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 TULP3O75386 442 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 STAT5AP42229 794 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 SLC1A2P43004 574 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 KLHL12Q53G59 568 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 GCNT6Q5T4J0 391 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 DPY19L3Q6ZPD9 716 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 TDRPQ86YL5 185 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 TMEM156Q8N614 296 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 CMASQ8NFW8 434 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-221ENST00000532331 KBTBD8Q8NFY9 601 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 PPM1MQ96MI6 270 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 EPB41L1Q9H4G0 881 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 MCCC2Q9HCC0 563 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 HCFC1R1Q9NWW0 138 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 DGKBQ9Y6T7 804 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 ITGB1P05556 798 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 TCEA1P23193 301 aaKnown RBP11.07□□□□□ -0.64
PTPRK-221ENST00000532331 PAFAH1B3Q15102 231 aaKnown RBP11.07□□□□□ -0.64
PTPRK-221ENST00000532331 GLYATQ6IB77 296 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 PTCHD4Q6ZW05 846 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 FAM98AQ8NCA5 519 aaKnown RBP11.07□□□□□ -0.64
PTPRK-221ENST00000532331 XYLT2Q9H1B5 865 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 EHD3Q9NZN3 535 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 FTSJ1Q9UET6 329 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 SPATA2Q9UM82 520 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 NAV1Q8NEY1 1877 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 A8MUA0 341 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 ASNA1O43681 348 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 ECDO95905 644 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-221ENST00000532331 ATP5A1P25705 553 aaKnown RBP11.07□□□□□ -0.64
PTPRK-221ENST00000532331 DPP6P42658 865 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 HNMTP50135 292 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 KLHL17Q6TDP4 642 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 NAPRTQ6XQN6 538 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 HM13Q8TCT9 377 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 PLEKHO2Q8TD55 490 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 EEF1AKMT1Q8WVE0 214 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 ZHX1-C8orf76Q96EF9 292 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 DGAT2Q96PD7 388 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 CLEC4MQ9H2X3 399 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-221ENST00000532331 IRGMA1A4Y4 181 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 OR51F1A6NGY5 319 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 RCVRNP35243 200 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 NR1H2P55055 460 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 C1orf61Q13536 156 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 CLEC6AQ6EIG7 209 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 KIAA1161Q6NSJ0 714 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 B3GNT6Q6ZMB0 384 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 ZNF354BQ96LW1 612 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 FANCFQ9NPI8 374 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 ACSL5Q9ULC5 683 aa11.07□□□□□ -0.64
PTPRK-221ENST00000532331 A6NCN8 305 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 PLIN3O60664 434 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 BEST1O76090 585 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 LAMP2P13473 410 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 XIAPP98170 497 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 GALNT2Q10471 571 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 ZSWIM7Q19AV6 140 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 FBXO48Q5FWF7 155 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 PEG10Q86TG7 708 aaKnown RBP11.06□□□□□ -0.64
PTPRK-221ENST00000532331 TMEM25Q86YD3 366 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 PIK3C3Q8NEB9 887 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 OR10H5Q8NGA6 315 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 VANGL1Q8TAA9 524 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-221ENST00000532331 SORCS1Q8WY21 1168 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 NMUR2Q9GZQ4 415 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 PDE7BQ9NP56 450 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 TAC3Q9UHF0 121 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 EIF2B4Q9UI10 523 aaKnown RBP11.06□□□□□ -0.64
PTPRK-221ENST00000532331 RFXAPO00287 272 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 NDUFS4O43181 175 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 MYBPC1Q00872 1141 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 SIM2Q14190 667 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-221ENST00000532331 LYSMD4Q5XG99 296 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 RPTNQ6XPR3 784 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 Q6ZVL8 140 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms