RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 SLC35G4P0C7Q5 338 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 PIRTP0C851 137 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 MIPP30301 263 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 ARL4AP40617 200 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 MEOX1P50221 254 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 ADAM8P78325 824 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 TMEM115Q12893 351 aaPredicted RBP7.89□□□□□ -1.15
CD44-232ENST00000531118 DPYSL2Q16555 572 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 NKG7Q16617 165 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 ATP13A5Q4VNC0 1218 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 ZNF468Q5VIY5 522 aaPredicted RBP7.89□□□□□ -1.15
CD44-232ENST00000531118 ALKBH2Q6NS38 261 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 SHISA6Q6ZSJ9 500 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 TRIM73Q86UV7 250 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 PSTKQ8IV42 348 aaKnown RBP7.89□□□□□ -1.15
CD44-232ENST00000531118 ZNF655Q8N720 491 aaPredicted RBP7.89□□□□□ -1.15
CD44-232ENST00000531118 GOLGA6L1Q8N7Z2 621 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 LRRN4CLQ8ND94 238 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 BRIX1Q8TDN6 353 aaKnown RBP7.89□□□□□ -1.15
CD44-232ENST00000531118 NUDT8Q8WV74 236 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 MAML1Q92585 1016 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 VPS50Q96JG6 964 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 GPR137Q96N19 417 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 CSPG4P5Q96PW8 444 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 DMRTA2Q96SC8 542 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 TUBGCP2Q9BSJ2 902 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 SPRTNQ9H040 489 aaPredicted RBP7.89□□□□□ -1.15
CD44-232ENST00000531118 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.89□□□□□ -1.15
CD44-232ENST00000531118 SOX17Q9H6I2 414 aaPredicted RBP7.89□□□□□ -1.15
CD44-232ENST00000531118 ZNF160Q9HCG1 818 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 FAM60AQ9NP50 221 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 NLRC4Q9NPP4 1024 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 PTGFRNQ9P2B2 879 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 CTSFQ9UBX1 484 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 KCNN3Q9UGI6 736 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 PHF3Q92576 2039 aaKnown RBP7.89□□□□□ -1.15
CD44-232ENST00000531118 FAM90A27PA6NNH2 459 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 MAP2K7O14733 419 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 ZWINTO95229 277 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 PRAMEF1O95521 474 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 UQCRHP07919 91 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 MMP2P08253 660 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 ACPPP15309 386 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 CES1P23141 567 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 ADH6P28332 368 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 SOX5P35711 763 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 CD86P42081 329 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 ZNF165P49910 485 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 JAM2P57087 298 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 TFF3Q07654 80 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 MYBPHQ13203 477 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 ZIC1Q15915 447 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 METRNLQ641Q3 311 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 HIBCHQ6NVY1 386 aaPredicted RBP7.88□□□□□ -1.15
CD44-232ENST00000531118 SPESP1Q6UW49 350 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 CLEC9AQ6UXN8 241 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 SLCO4C1Q6ZQN7 724 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 TMC3Q7Z5M5 1100 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 POLNQ7Z5Q5 900 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 SPPL2CQ8IUH8 684 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 HSCBQ8IWL3 235 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 DMRTC2Q8IXT2 367 aaPredicted RBP7.88□□□□□ -1.15
CD44-232ENST00000531118 KBTBD2Q8IY47 623 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 SIRT6Q8N6T7 355 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 RASGEF1AQ8N9B8 481 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 DNAAF3Q8N9W5 541 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 DDHD1Q8NEL9 900 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 ACVR1CQ8NER5 493 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 CCDC110Q8TBZ0 833 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 BRSK1Q8TDC3 778 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 AGAP11Q8TF27 550 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 THAP3Q8WTV1 239 aaPredicted RBP7.88□□□□□ -1.15
CD44-232ENST00000531118 LCN9Q8WX39 176 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 PSMF1Q92530 271 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 HAS2Q92819 552 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 C18orf12Q96KH6 178 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 TTC25Q96NG3 672 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 NRTNQ99748 197 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 RNF32Q9H0A6 362 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 SLC26A1Q9H2B4 701 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 SRMSQ9H3Y6 488 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 SEPT11Q9NVA2 429 aaKnown RBP7.88□□□□□ -1.15
CD44-232ENST00000531118 IRAK4Q9NWZ3 460 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 ACTR10Q9NZ32 417 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 FAM8A1Q9UBU6 413 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 AMACRQ9UHK6 382 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 NXT1Q9UKK6 140 aaKnown RBP7.88□□□□□ -1.15
CD44-232ENST00000531118 PPT2Q9UMR5 302 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 PLEKHA6Q9Y2H5 1048 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 MRPS2Q9Y399 296 aaKnown RBP7.88□□□□□ -1.15
CD44-232ENST00000531118 SCN2AQ99250 2005 aa7.88□□□□□ -1.15
CD44-232ENST00000531118 FBN1P35555 2871 aaKnown RBP7.87□□□□□ -1.15
CD44-232ENST00000531118 A0A1B0GX78 115 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 NKX2-6A6NCS4 301 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 C2orf74A8MZ97 194 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 E9PLN8 166 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 FAM227AF5H4B4 570 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 ADAM10O14672 748 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 WDPCPO95876 746 aa7.87□□□□□ -1.15
CD44-232ENST00000531118 ALBP02768 609 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms