RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 CDKN1CP49918 316 aaPredicted RBP18.21■□□□□ 0.51
SSRP1-204ENST00000529002 XIAPP98170 497 aa18.21■□□□□ 0.51
SSRP1-204ENST00000529002 RBBP7Q16576 425 aa18.21■□□□□ 0.51
SSRP1-204ENST00000529002 ALKBH5Q6P6C2 394 aaKnown RBP18.21■□□□□ 0.51
SSRP1-204ENST00000529002 C8orf44Q96CB5 159 aa18.21■□□□□ 0.51
SSRP1-204ENST00000529002 LMF1Q96S06 567 aa18.21■□□□□ 0.51
SSRP1-204ENST00000529002 PACSIN1Q9BY11 444 aa18.21■□□□□ 0.51
SSRP1-204ENST00000529002 ZNF160Q9HCG1 818 aa18.21■□□□□ 0.51
SSRP1-204ENST00000529002 EURLQ9NYK6 297 aa18.21■□□□□ 0.51
SSRP1-204ENST00000529002 KLHL33A6NCF5 533 aa18.2■□□□□ 0.5
SSRP1-204ENST00000529002 KCNN4O15554 427 aa18.2■□□□□ 0.5
SSRP1-204ENST00000529002 EPOP01588 193 aa18.2■□□□□ 0.5
SSRP1-204ENST00000529002 PYGMP11217 842 aa18.2■□□□□ 0.5
SSRP1-204ENST00000529002 OR1D4P47884 311 aa18.2■□□□□ 0.5
SSRP1-204ENST00000529002 STX1AQ16623 288 aa18.2■□□□□ 0.5
SSRP1-204ENST00000529002 SASS6Q6UVJ0 657 aa18.2■□□□□ 0.5
SSRP1-204ENST00000529002 NCCRP1Q6ZVX7 275 aaPredicted RBP18.2■□□□□ 0.5
SSRP1-204ENST00000529002 PRSS58Q8IYP2 241 aa18.2■□□□□ 0.5
SSRP1-204ENST00000529002 OR13C4Q8NGS5 318 aa18.2■□□□□ 0.5
SSRP1-204ENST00000529002 RNF25Q96BH1 459 aaPredicted RBP18.2■□□□□ 0.5
SSRP1-204ENST00000529002 MAK16Q9BXY0 300 aaKnown RBP18.2■□□□□ 0.5
SSRP1-204ENST00000529002 PTGFRNQ9P2B2 879 aa18.2■□□□□ 0.5
SSRP1-204ENST00000529002 PLCL2Q9UPR0 1127 aa18.2■□□□□ 0.5
SSRP1-204ENST00000529002 PRSS56P0CW18 603 aa18.19■□□□□ 0.5
SSRP1-204ENST00000529002 ATP1B2P14415 290 aaPredicted RBP18.19■□□□□ 0.5
SSRP1-204ENST00000529002 PECAM1P16284 738 aaPredicted RBP18.19■□□□□ 0.5
SSRP1-204ENST00000529002 SSTR2P30874 369 aa18.19■□□□□ 0.5
SSRP1-204ENST00000529002 TNFSF10P50591 281 aa18.19■□□□□ 0.5
SSRP1-204ENST00000529002 MESDQ14696 234 aa18.19■□□□□ 0.5
SSRP1-204ENST00000529002 ZNF567Q8N184 647 aa18.19■□□□□ 0.5
SSRP1-204ENST00000529002 SIRT6Q8N6T7 355 aa18.19■□□□□ 0.5
SSRP1-204ENST00000529002 PSMF1Q92530 271 aa18.19■□□□□ 0.5
SSRP1-204ENST00000529002 FKBP10Q96AY3 582 aa18.19■□□□□ 0.5
SSRP1-204ENST00000529002 APOL2Q9BQE5 337 aa18.19■□□□□ 0.5
SSRP1-204ENST00000529002 CHRNA10Q9GZZ6 450 aa18.19■□□□□ 0.5
SSRP1-204ENST00000529002 LMBRD1Q9NUN5 540 aa18.19■□□□□ 0.5
SSRP1-204ENST00000529002 KLHL8Q9P2G9 620 aaPredicted RBP18.19■□□□□ 0.5
SSRP1-204ENST00000529002 TDRKHQ9Y2W6 561 aaKnown RBP18.19■□□□□ 0.5
SSRP1-204ENST00000529002 MAU2Q9Y6X3 613 aa18.19■□□□□ 0.5
SSRP1-204ENST00000529002 C17orf113A0A1B0GUU1 675 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 A0A1B0GX78 115 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 ISM1B1AKI9 464 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 CELA2AP08217 269 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 MAGP20916 626 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 TNNT3P45378 269 aaPredicted RBP18.18■□□□□ 0.5
SSRP1-204ENST00000529002 CD151P48509 253 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 PMP22Q01453 160 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 C3AR1Q16581 482 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 SLC5A12Q1EHB4 618 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 RPTNQ6XPR3 784 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 NAPRTQ6XQN6 538 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 BRIX1Q8TDN6 353 aaKnown RBP18.18■□□□□ 0.5
SSRP1-204ENST00000529002 NACC2Q96BF6 587 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 FCRL5Q96RD9 977 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 FICDQ9BVA6 458 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 WDR54Q9H977 334 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 SEC14L3Q9UDX4 400 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 TINAGQ9UJW2 476 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 NEU2Q9Y3R4 380 aa18.18■□□□□ 0.5
SSRP1-204ENST00000529002 AGAP14A8MT82 685 aa18.17■□□□□ 0.5
SSRP1-204ENST00000529002 MED26O95402 600 aa18.17■□□□□ 0.5
SSRP1-204ENST00000529002 KRT1P04264 644 aa18.17■□□□□ 0.5
SSRP1-204ENST00000529002 RALBP11234 206 aa18.17■□□□□ 0.5
SSRP1-204ENST00000529002 SHMT2P34897 504 aa18.17■□□□□ 0.5
SSRP1-204ENST00000529002 GRIA3P42263 894 aa18.17■□□□□ 0.5
SSRP1-204ENST00000529002 TLE4Q04727 773 aa18.17■□□□□ 0.5
SSRP1-204ENST00000529002 BRD3Q15059 726 aa18.17■□□□□ 0.5
SSRP1-204ENST00000529002 XKRXQ6PP77 449 aa18.17■□□□□ 0.5
SSRP1-204ENST00000529002 PID1Q7Z2X4 250 aa18.17■□□□□ 0.5
SSRP1-204ENST00000529002 MCATQ8IVS2 390 aaKnown RBP18.17■□□□□ 0.5
SSRP1-204ENST00000529002 C2orf73Q8N5S3 287 aaPredicted RBP18.17■□□□□ 0.5
SSRP1-204ENST00000529002 CLDN19Q8N6F1 224 aa18.17■□□□□ 0.5
SSRP1-204ENST00000529002 TFB1MQ8WVM0 346 aaKnown RBP18.17■□□□□ 0.5
SSRP1-204ENST00000529002 MTFMTQ96DP5 389 aaKnown RBP18.17■□□□□ 0.5
SSRP1-204ENST00000529002 COPS8Q99627 209 aa18.17■□□□□ 0.5
SSRP1-204ENST00000529002 GORASP1Q9BQQ3 440 aa18.17■□□□□ 0.5
SSRP1-204ENST00000529002 SLC26A1Q9H2B4 701 aa18.17■□□□□ 0.5
SSRP1-204ENST00000529002 MRM3Q9HC36 420 aaKnown RBP18.17■□□□□ 0.5
SSRP1-204ENST00000529002 CUTCQ9NTM9 273 aa18.17■□□□□ 0.5
SSRP1-204ENST00000529002 NENFQ9UMX5 172 aa18.17■□□□□ 0.5
SSRP1-204ENST00000529002 PRRC2AP48634 2157 aaKnown RBP18.17■□□□□ 0.5
SSRP1-204ENST00000529002 TRAV17A0A0B4J275 112 aa18.16■□□□□ 0.5
SSRP1-204ENST00000529002 DYTNA2CJ06 578 aa18.16■□□□□ 0.5
SSRP1-204ENST00000529002 DSCR3O14972 297 aa18.16■□□□□ 0.5
SSRP1-204ENST00000529002 ONECUT2O95948 504 aa18.16■□□□□ 0.5
SSRP1-204ENST00000529002 ALBP02768 609 aa18.16■□□□□ 0.5
SSRP1-204ENST00000529002 SERPING1P05155 500 aa18.16■□□□□ 0.5
SSRP1-204ENST00000529002 TNNT1P13805 278 aa18.16■□□□□ 0.5
SSRP1-204ENST00000529002 HOXB4P17483 251 aaPredicted RBP18.16■□□□□ 0.5
SSRP1-204ENST00000529002 SOX11P35716 441 aa18.16■□□□□ 0.5
SSRP1-204ENST00000529002 TAF1AQ15573 450 aaPredicted RBP18.16■□□□□ 0.5
SSRP1-204ENST00000529002 MFSD7Q6UXD7 560 aa18.16■□□□□ 0.5
SSRP1-204ENST00000529002 ARHGEF18Q6ZSZ5 1173 aa18.16■□□□□ 0.5
SSRP1-204ENST00000529002 CEP97Q8IW35 865 aa18.16■□□□□ 0.5
SSRP1-204ENST00000529002 DLG3Q92796 817 aa18.16■□□□□ 0.5
SSRP1-204ENST00000529002 CRB3Q9BUF7 120 aa18.16■□□□□ 0.5
SSRP1-204ENST00000529002 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.16■□□□□ 0.5
SSRP1-204ENST00000529002 C10orf88Q9H8K7 445 aa18.16■□□□□ 0.5
SSRP1-204ENST00000529002 SEMA3GQ9NS98 782 aa18.16■□□□□ 0.5
SSRP1-204ENST00000529002 CIDEBQ9UHD4 219 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms