RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 ITIH4Q14624 930 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 GSE1Q14687 1217 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 POU6F1Q14863 301 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 GPR19Q15760 415 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 SEL1L2Q5TEA6 688 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 MEI1Q5TIA1 1274 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 ARMC6Q6NXE6 501 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 ZNF449Q6P9G9 518 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 CERS6Q6ZMG9 384 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 Q6ZS92 163 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 KCNMB4Q86W47 210 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 SERPINA9Q86WD7 417 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 OOSP2Q86WS3 158 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 SLC13A5Q86YT5 568 aaPredicted RBP10.19□□□□□ -0.78
CPSF1-203ENST00000527916 SYTL1Q8IYJ3 562 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 ACVR1CQ8NER5 493 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 SPDYE1Q8NFV5 336 aaPredicted RBP10.19□□□□□ -0.78
CPSF1-203ENST00000527916 COG1Q8WTW3 980 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 PEX13Q92968 403 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 ZNF501Q96CX3 271 aaPredicted RBP10.19□□□□□ -0.78
CPSF1-203ENST00000527916 DNAJC1Q96KC8 554 aaKnown RBP10.19□□□□□ -0.78
CPSF1-203ENST00000527916 ALS2CR12Q96Q35 445 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 DPH2Q9BQC3 489 aaPredicted RBP10.19□□□□□ -0.78
CPSF1-203ENST00000527916 DHRS4Q9BTZ2 278 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 SLC7A5P2Q9GIP4 190 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 OR52A5Q9H2C5 316 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 FAM96AQ9H5X1 160 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 ETNK1Q9HBU6 452 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 SYTL2Q9HCH5 934 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 CHST11Q9NPF2 352 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 HRASLS2Q9NWW9 162 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 SOHLH2Q9NX45 425 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 GUCA1BQ9UMX6 200 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 NTNG1Q9Y2I2 539 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 KLF2Q9Y5W3 355 aaPredicted RBP10.19□□□□□ -0.78
CPSF1-203ENST00000527916 CFAP20Q9Y6A4 193 aaKnown RBP10.19□□□□□ -0.78
CPSF1-203ENST00000527916 ABCA2Q9BZC7 2435 aa10.19□□□□□ -0.78
CPSF1-203ENST00000527916 IFRD1O00458 451 aaPredicted RBP10.18□□□□□ -0.78
CPSF1-203ENST00000527916 MAP3K7O43318 606 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 POLBP06746 335 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 CYP2A7P20853 494 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 AGXTP21549 392 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 ADRA1DP25100 572 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 NSG1P42857 185 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 CDKN1CP49918 316 aaPredicted RBP10.18□□□□□ -0.78
CPSF1-203ENST00000527916 PLOD1Q02809 727 aaPredicted RBP10.18□□□□□ -0.78
CPSF1-203ENST00000527916 ACVR1Q04771 509 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 KRT33BQ14525 404 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 NCF4Q15080 339 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 RPS6KA1Q15418 735 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 CCNG2Q16589 344 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 DCAF10Q5QP82 559 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 FAM69BQ5VUD6 431 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 LCN10Q6JVE6 187 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 DRICH1Q6PGQ1 229 aaPredicted RBP10.18□□□□□ -0.78
CPSF1-203ENST00000527916 C4orf22Q6V702 233 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 PACS1Q6VY07 963 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 TAS2R42Q7RTR8 314 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 MRGPREQ86SM8 312 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 CUZD1Q86UP6 607 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 FJX1Q86VR8 437 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 PIANPQ8IYJ0 282 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 ATG4AQ8WYN0 398 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 INPP5DQ92835 1189 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 RMDN2Q96LZ7 410 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 C17orf62Q9BQA9 187 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 TFB2MQ9H5Q4 396 aaKnown RBP10.18□□□□□ -0.78
CPSF1-203ENST00000527916 MVB12BQ9H7P6 319 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 COG4Q9H9E3 785 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 ACTR5Q9H9F9 607 aaPredicted RBP10.18□□□□□ -0.78
CPSF1-203ENST00000527916 ZNF148Q9UQR1 794 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 DRG1Q9Y295 367 aaKnown RBP10.18□□□□□ -0.78
CPSF1-203ENST00000527916 ZKSCAN5Q9Y2L8 839 aa10.18□□□□□ -0.78
CPSF1-203ENST00000527916 OR6C74A6NCV1 312 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 F8W8V4 182 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 CCL22O00626 93 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 LIN7AO14910 233 aaPredicted RBP10.17□□□□□ -0.78
CPSF1-203ENST00000527916 CAPN1P07384 714 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 STSP08842 583 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 CD63P08962 238 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 MSL3P1P0C860 447 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 COX6B1P14854 86 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 MSNP26038 577 aaKnown RBP10.17□□□□□ -0.78
CPSF1-203ENST00000527916 FOXN2P32314 431 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 RORAP35398 523 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 PRKAA1Q13131 559 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 SSPNQ14714 243 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 DBN1Q16643 649 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 FAM198BQ6UWH4 519 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 NLRP9Q7RTR0 991 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 LILRA3Q8N6C8 439 aaPredicted RBP10.17□□□□□ -0.78
CPSF1-203ENST00000527916 DNAAF3Q8N9W5 541 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 OR4E2Q8NGC2 313 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 OR52K1Q8NGK4 314 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 GRHL3Q8TE85 626 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 NAT14Q8WUY8 206 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 FAR1Q8WVX9 515 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 MAIP1Q8WWC4 291 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 FERD3LQ96RJ6 166 aa10.17□□□□□ -0.78
CPSF1-203ENST00000527916 TTC1Q99614 292 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms