RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 ZWINTO95229 277 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 HSPA4LO95757 839 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 NGFP01138 241 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 TPOP07202 933 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 ABCB1P08183 1280 aaPredicted RBP4.19□□□□□ -1.74
CD44-223ENST00000526553 ZNF883P0CG24 379 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 VDRP11473 427 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 ZNF26P17031 533 aaPredicted RBP4.19□□□□□ -1.74
CD44-223ENST00000526553 RAD23AP54725 363 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 PSMC6P62333 389 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 UBXN2AP68543 259 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 PRKCZQ05513 592 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 TUBB2AQ13885 445 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 P2RY6Q15077 328 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 TAF13Q15543 124 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 FFAR4Q5NUL3 377 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 DCAF10Q5QP82 559 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 ERMARDQ5T6L9 678 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 CCDC186Q7Z3E2 898 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 LINC00346Q8IVM7 164 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 FAM114A1Q8IWE2 563 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 CEP57L1Q8IYX8 460 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 ZNF843Q8N446 348 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 FBXO39Q8N4B4 442 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 MINDY1Q8N5J2 469 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 TRIML1Q8N9V2 468 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 TDRD5Q8NAT2 981 aaKnown RBP4.19□□□□□ -1.74
CD44-223ENST00000526553 ZNF622Q969S3 477 aaKnown RBP eCLIP4.19□□□□□ -1.74
CD44-223ENST00000526553 ADPGKQ9BRR6 497 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 TUBB2BQ9BVA1 445 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 FNDC11Q9BVV2 318 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 RSPH9Q9H1X1 276 aaPredicted RBP4.19□□□□□ -1.74
CD44-223ENST00000526553 ALDH8A1Q9H2A2 487 aaPredicted RBP4.19□□□□□ -1.74
CD44-223ENST00000526553 ZNF701Q9NV72 531 aaPredicted RBP4.19□□□□□ -1.74
CD44-223ENST00000526553 ZDHHC2Q9UIJ5 367 aa4.19□□□□□ -1.74
CD44-223ENST00000526553 LOC101059948A0A1B0GTJ6 334 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 TCRBV21S2A2A0A5A6 115 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 TSPAN1O60635 241 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 PRKRAO75569 313 aaKnown RBP4.18□□□□□ -1.74
CD44-223ENST00000526553 MYBL1P10243 752 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 GLULP15104 373 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 GABRA5P31644 462 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 PDX1P52945 283 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 ZFP69Q49AA0 526 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 IGSF11Q5DX21 431 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 C1QTNF12Q5T7M4 302 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 ARHGEF16Q5VV41 709 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 TEX38Q6PEX7 206 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 CHST3Q7LGC8 479 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 SLFN11Q7Z7L1 901 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 KRTAP7-1Q8IUC3 87 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 OLIG1Q8TAK6 271 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 LPGAT1Q92604 370 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 PGAP3Q96FM1 320 aaPredicted RBP4.18□□□□□ -1.74
CD44-223ENST00000526553 MS4A10Q96PG2 267 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 ABHD1Q96SE0 405 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 KLHL4Q9C0H6 718 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 LAT2Q9GZY6 243 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 FGF22Q9HCT0 170 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 ARGLU1Q9NWB6 273 aaPredicted RBP4.18□□□□□ -1.74
CD44-223ENST00000526553 MTUS1Q9ULD2 1270 aa4.18□□□□□ -1.74
CD44-223ENST00000526553 MEIOCA2RUB1 952 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 ANKUB1A6NFN9 424 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 CYSRT1A8MQ03 144 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 ZNF197O14709 1029 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 TRMUO75648 421 aaKnown RBP4.17□□□□□ -1.74
CD44-223ENST00000526553 AP2A2O94973 939 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 WDPCPO95876 746 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 CA4P22748 312 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 CTNNA1P35221 906 aaKnown RBP4.17□□□□□ -1.74
CD44-223ENST00000526553 TFCP2Q12800 502 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 SCARB2Q14108 478 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 CRY2Q49AN0 593 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 CCDC184Q52MB2 194 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 TMPRSS11FQ6ZWK6 438 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 SLC16A9Q7RTY1 509 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 COMMD2Q86X83 199 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 ZNF611Q8N823 705 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 OR5M8Q8NGP6 311 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 OR13J1Q8NGT2 312 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 EXD1Q8NHP7 514 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 FGFBP3Q8TAT2 258 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 ZFAND2BQ8WV99 257 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 ATP6V1E2Q96A05 226 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 TMCO6Q96DC7 493 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 ART5Q96L15 291 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 WDR13Q9H1Z4 485 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 A4GALTQ9NPC4 353 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 ANAPC2Q9UJX6 822 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 TRPV2Q9Y5S1 764 aa4.17□□□□□ -1.74
CD44-223ENST00000526553 IGHV4-4A0A075B6R2 117 aa4.16□□□□□ -1.74
CD44-223ENST00000526553 IGKV3D-15A0A087WSY6 115 aa4.16□□□□□ -1.74
CD44-223ENST00000526553 CCDC175P0C221 793 aa4.16□□□□□ -1.74
CD44-223ENST00000526553 OR2T7P0C7T2 308 aa4.16□□□□□ -1.74
CD44-223ENST00000526553 CA6P23280 308 aa4.16□□□□□ -1.74
CD44-223ENST00000526553 SP100P23497 879 aaPredicted RBP4.16□□□□□ -1.74
CD44-223ENST00000526553 SLC9A3P48764 834 aa4.16□□□□□ -1.74
CD44-223ENST00000526553 ZNF41P51814 821 aaPredicted RBP4.16□□□□□ -1.74
CD44-223ENST00000526553 ALCAMQ13740 583 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms