RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SLC9B1P1A6NJY1 282 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 CDRT15L2A8MXV6 281 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 ESPNB1AK53 854 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 BTN3A1O00481 513 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 CASC3O15234 703 aaKnown RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 TP73O15350 636 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZNF500O60304 480 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 PRAMEF10O60809 474 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 PSIP1O75475 530 aaKnown RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 FKBP9O95302 570 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 MATN4O95460 622 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 C1orf105O95561 183 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 INHBAP08476 426 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 LIPCP11150 499 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 FGF3P11487 239 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 CCL4P13236 92 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 UGT2B7P16662 529 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 STMN1P16949 149 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 NELFEP18615 380 aaKnown RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 CD9P21926 228 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 PRDX3P30048 256 aaKnown RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLC5A2P31639 672 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 RPA3P35244 121 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 SPRP35270 261 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 ABCG1P45844 678 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 KPNA2P52292 529 aaKnown RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 UCNP55089 124 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 CDKN2DP55273 166 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 MC2RQ01718 297 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 POU4F1Q01851 419 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 CFHR1Q03591 330 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 GBX1Q14549 363 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 USP10Q14694 798 aaKnown RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 ARHGAP19Q14CB8 494 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 SF1Q15637 639 aaKnown RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 UAP1Q16222 522 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 KYNUQ16719 465 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLC5A12Q1EHB4 618 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 RBM20Q5T481 1227 aaKnown RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 GRTP1Q5TC63 336 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 THEMIS2Q5TEJ8 643 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZNF549Q6P9A3 640 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 FBXO38Q6PIJ6 1188 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 XKR5Q6UX68 686 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 FRA10AC1Q70Z53 315 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 UBE2R2Q712K3 238 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 CYS1Q717R9 158 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 TAX1BP1Q86VP1 789 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZC3HC1Q86WB0 502 aaKnown RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 PPP1R3BQ86XI6 285 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 SYTL1Q8IYJ3 562 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 GPR135Q8IZ08 494 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 CNPY4Q8N129 248 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 NKAPQ8N5F7 415 aaKnown RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 PPM1NQ8N819 430 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZSCAN1Q8NBB4 408 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 OR9A1PQ8NGU1 263 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 OR2L8Q8NGY9 312 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 FBF1Q8TES7 1133 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 KLHL6Q8WZ60 621 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 SMPDL3AQ92484 453 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 KIAA1143Q96AT1 154 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 LINGO1Q96FE5 620 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 TCTN2Q96GX1 697 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 PRR11Q96HE9 360 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 NAF1Q96HR8 494 aaKnown RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLC41A2Q96JW4 573 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 OR6C1Q96RD1 312 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 CYTH2Q99418 400 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 RBBP8Q99708 897 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 MAP3K3Q99759 626 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 WDR83Q9BRX9 315 aaKnown RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 DPH1Q9BZG8 443 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 ULBP3Q9BZM4 244 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 POPDC3Q9HBV1 291 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 ASCL3Q9NQ33 180 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 FBXO8Q9NRD0 319 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 FGF21Q9NSA1 209 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZDHHC18Q9NUE0 388 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLC17A6Q9P2U8 582 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 RARRES3Q9UL19 164 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 RUVBL2Q9Y230 463 aaKnown RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 RAXQ9Y2V3 346 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 VWA7Q9Y334 891 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 PCDHGA3Q9Y5H0 932 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 NFS1Q9Y697 457 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 CNOT1A5YKK6 2376 aaKnown RBP5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 PLXNB3Q9ULL4 1909 aa5.23□□□□□ -1.57
HMGB1P40-201ENST00000525121 NCOR2Q9Y618 2525 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 A0A087WUV0 522 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 IGHV5-51A0A0C4DH38 117 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 A0A1W2PNU3 283 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 PMS2P1A4D2B8 440 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 PCNX2A6NKB5 2137 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 FAM159BA6NKW6 160 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 ARHGEF33A8MVX0 844 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 MYO1CO00159 1063 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 BTN3A3O00478 584 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLC16A5O15375 505 aa5.22□□□□□ -1.57
HMGB1P40-201ENST00000525121 KLK10O43240 276 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms