RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 E7EQ34 232 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 GOLGA8MH3BSY2 632 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 KPNA5O15131 536 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 PFDN6O15212 129 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 SLCO2B1O94956 709 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 ZIC2O95409 532 aaPredicted RBP17.92■□□□□ 0.46
CAPN1-203ENST00000525013 PAMP19021 973 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 ARNTP27540 789 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 FMO4P31512 558 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 MAGEA6P43360 314 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 RAB28P51157 221 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 KIR2DS3Q14952 304 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 DEFB110Q30KQ9 67 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 ZNF789Q5FWF6 425 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 CCDC137Q6PK04 289 aaKnown RBP17.92■□□□□ 0.46
CAPN1-203ENST00000525013 UNC5DQ6UXZ4 953 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 ATG14Q6ZNE5 492 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 CAND1Q86VP6 1230 aaKnown RBP17.92■□□□□ 0.46
CAPN1-203ENST00000525013 DCUN1D3Q8IWE4 304 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 DSELQ8IZU8 1212 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 COG1Q8WTW3 980 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 ABHD17AQ96GS6 310 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 LRFN5Q96NI6 719 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 FAM60AQ9NP50 221 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 TRMT1Q9NXH9 659 aaKnown RBP17.92■□□□□ 0.46
CAPN1-203ENST00000525013 MAN2B2Q9Y2E5 1009 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 NBASA2RRP1 2371 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 PCM1Q15154 2024 aa17.92■□□□□ 0.46
CAPN1-203ENST00000525013 FER1L5A0AVI2 2057 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 ZNF749O43361 778 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 OR2B3O76000 313 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 RECKO95980 971 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 RPS3P23396 243 aaKnown RBP eCLIP17.91■□□□□ 0.46
CAPN1-203ENST00000525013 PKLRP30613 574 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 ZIC1Q15915 447 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 KYNUQ16719 465 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 RNF187Q5TA31 235 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-203ENST00000525013 LCN10Q6JVE6 187 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 TTC23LQ6PF05 361 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 SYVN1Q86TM6 617 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 TAX1BP1Q86VP1 789 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 SYTL1Q8IYJ3 562 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 FLVCR1-AS1Q8TAF5 88 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 SEC14L1Q92503 715 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 FAM136AQ96C01 138 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 OSBPL9Q96SU4 736 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 TCF12Q99081 682 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 IRAK4Q9NWZ3 460 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 TSR3Q9UJK0 312 aaKnown RBP17.91■□□□□ 0.46
CAPN1-203ENST00000525013 SLC39A10Q9ULF5 831 aa17.91■□□□□ 0.46
CAPN1-203ENST00000525013 FLNBO75369 2602 aaKnown RBP17.91■□□□□ 0.46
CAPN1-203ENST00000525013 GOLGA6L10A0A0M3HER8 536 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 SDR42E2A6NKP2 422 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 SUV39H1O43463 412 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 KIF5CO60282 957 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 TMEM63AO94886 807 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 HBQ1P09105 142 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 ATXN8OSP0DMR3 200 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 PEBP1P30086 187 aaKnown RBP17.9■□□□□ 0.46
CAPN1-203ENST00000525013 RORAP35398 523 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 CYP1B1Q16678 543 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 SLC5A12Q1EHB4 618 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 PTCHD3Q3KNS1 767 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 CTSL3PQ5NE16 218 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 KIAA0930Q6ICG6 404 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-203ENST00000525013 NEPROQ6NW34 567 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 ZNF517Q6ZMY9 492 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-203ENST00000525013 FAM20CQ8IXL6 584 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 ENDOVQ8N8Q3 282 aaKnown RBP17.9■□□□□ 0.46
CAPN1-203ENST00000525013 LMNTD1Q8N9Z9 388 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 LPGAT1Q92604 370 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 IL17FQ96PD4 163 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 TRIM56Q9BRZ2 755 aaKnown RBP17.9■□□□□ 0.46
CAPN1-203ENST00000525013 TRIM4Q9C037 500 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 XAB2Q9HCS7 855 aaKnown RBP17.9■□□□□ 0.46
CAPN1-203ENST00000525013 PCMTD2Q9NV79 361 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-203ENST00000525013 SNX7Q9UNH6 387 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 CRYL1Q9Y2S2 319 aa17.9■□□□□ 0.46
CAPN1-203ENST00000525013 MKRN2OSH3BPM6 223 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 PHF2O75151 1096 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 NIPSNAP2O75323 286 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 RFPL1O75677 317 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 MLNP12872 115 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 AGXTP21549 392 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 CD9P21926 228 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 DHX34Q14147 1143 aaKnown RBP17.89■□□□□ 0.45
CAPN1-203ENST00000525013 UGT8Q16880 541 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 TYSND1Q2T9J0 566 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 IZUMO3Q5VZ72 239 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 ARMC3Q5W041 872 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 CNSTQ6PJW8 725 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 LINC01555Q8NAE3 123 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 MCUQ8NE86 351 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 ACTRT1Q8TDG2 376 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 GRK7Q8WTQ7 553 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 SLC22A18Q96BI1 424 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 ZNF669Q96BR6 464 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-203ENST00000525013 FOPNLQ96NB1 174 aa17.89■□□□□ 0.45
CAPN1-203ENST00000525013 BIRC8Q96P09 236 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms