RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 C8orf48Q96LL4 319 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 DUSP26Q9BV47 211 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 UBE2QL1A1L167 161 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 TOR1BO14657 336 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 RPL17P18621 184 aaKnown RBP13.55□□□□□ -0.24
SYNPO-205ENST00000522122 RAB43Q86YS6 212 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 RASSF5Q8WWW0 418 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 SLC38A4Q969I6 547 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 GTPBP3Q969Y2 492 aaKnown RBP13.55□□□□□ -0.24
SYNPO-205ENST00000522122 MTERF1Q99551 399 aaKnown RBP13.55□□□□□ -0.24
SYNPO-205ENST00000522122 SMOC2Q9H3U7 446 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 EQTNQ9NQ60 294 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 ZNF222Q9UK12 451 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 N6AMT1Q9Y5N5 214 aa13.55□□□□□ -0.24
SYNPO-205ENST00000522122 A0A1W2PP18 115 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 PIRO00625 290 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 CCNB2O95067 398 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 POU2F1P14859 743 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 SF1Q15637 639 aaKnown RBP13.54□□□□□ -0.24
SYNPO-205ENST00000522122 BICRALQ6AI39 1079 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 GPR153Q6NV75 609 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 CYP2U1Q7Z449 544 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 FCGR1BQ92637 280 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 HSPBAP1Q96EW2 488 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 MAT2BQ9NZL9 334 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 MYOCOSA0A1B0GUC4 107 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 NFKBIEO00221 500 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 PGLSO95336 258 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 PFKMP08237 780 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 C7P10643 843 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 PRPS1L1P21108 318 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 DGKQP52824 942 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 RAB25P57735 213 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 TMPRSS11AQ6ZMR5 421 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 CLIP3Q96DZ5 547 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 MYOCQ99972 504 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 PHPT1Q9NRX4 125 aaPredicted RBP13.54□□□□□ -0.24
SYNPO-205ENST00000522122 TMEM9Q9P0T7 183 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 ILVBLA1L0T0 632 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 CACNB4O00305 520 aaPredicted RBP13.54□□□□□ -0.24
SYNPO-205ENST00000522122 SLC30A4O14863 429 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 DHFRP00374 187 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 PRNPP04156 253 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 UGT1A6P19224 532 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 UGT1A1P22309 533 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 UGT1A4P22310 534 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 VARSP26640 1264 aaKnown RBP13.54□□□□□ -0.24
SYNPO-205ENST00000522122 UGT1A3P35503 534 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 UGT1A5P35504 534 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 MAGEA3P43357 314 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 CARTPTQ16568 116 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 NEK5Q6P3R8 708 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 PRSS55Q6UWB4 352 aaPredicted RBP13.54□□□□□ -0.24
SYNPO-205ENST00000522122 ALDH16A1Q8IZ83 802 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 MINDY2Q8NBR6 621 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 DBF4BQ8NFT6 615 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 ACDQ96AP0 544 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 HEPHQ9BQS7 1158 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 TXNRD2Q9NNW7 524 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 ABCB9Q9NP78 766 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 CHURC1-FNTBB4DL54 471 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 CDC7O00311 574 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 PRKD3O94806 890 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 IFNGP01579 166 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 HKDC1Q2TB90 917 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 PDCD4Q53EL6 469 aaKnown RBP13.54□□□□□ -0.24
SYNPO-205ENST00000522122 ADGRF1Q5T601 910 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 PIK3R6Q5UE93 754 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 TMBIM1Q969X1 311 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 C20orf27Q9GZN8 174 aa13.54□□□□□ -0.24
SYNPO-205ENST00000522122 ZNF282Q9UDV7 671 aaPredicted RBP13.54□□□□□ -0.24
SYNPO-205ENST00000522122 GSAPA4D1B5 854 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 AREL1O15033 823 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 ACVRL1P37023 503 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 ACADVLP49748 655 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 NFKB2Q00653 900 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 HEPACAMQ14CZ8 416 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 PLA2G4EQ3MJ16 856 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 ZFP69Q49AA0 526 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 ZNF678Q5SXM1 525 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 PRR23BQ6ZRT6 265 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 LAPTM4BQ86VI4 370 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 CILP2Q8IUL8 1156 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 MAPK15Q8TD08 544 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 ARNTL2Q8WYA1 636 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 CYP2S1Q96SQ9 504 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 OR5F1O95221 314 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 GADD45GO95257 159 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 ANXA8P13928 327 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 RGS8P57771 180 aaPredicted RBP13.53□□□□□ -0.24
SYNPO-205ENST00000522122 SCN1BQ07699 218 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 TECRLQ5HYJ1 363 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 PDE12Q6L8Q7 609 aaKnown RBP13.53□□□□□ -0.24
SYNPO-205ENST00000522122 NANOGNBQ7Z5D8 188 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
SYNPO-205ENST00000522122 AHCYL2Q96HN2 611 aaKnown RBP13.53□□□□□ -0.24
SYNPO-205ENST00000522122 KLHL32Q96NJ5 620 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 ZCWPW2A0A1B0GU75 182 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 CHST10O43529 356 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 FGF19O95750 216 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms