RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 CDH2P19022 906 aaPredicted RBP9.92□□□□□ -0.82
MCF2-209ENST00000520602 OR4D2P58180 307 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 SGCGQ13326 291 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 PDCD4Q53EL6 469 aaKnown RBP9.92□□□□□ -0.82
MCF2-209ENST00000520602 ERMP1Q7Z2K6 904 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 PELI3Q8N2H9 469 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 NSMCE3Q96MG7 304 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 RAD9AQ99638 391 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 SOX17Q9H6I2 414 aaPredicted RBP9.92□□□□□ -0.82
MCF2-209ENST00000520602 C1QTNF3-AMACRE9PGA6 284 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 G3V2T6 193 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 E2F3O00716 465 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 GBAP04062 536 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 GPC1P35052 558 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 CLCN7P51798 805 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 SLC14A2Q15849 920 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 PAGE2BQ5JRK9 111 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 SDE2Q6IQ49 451 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 CAPN13Q6MZZ7 669 aaPredicted RBP9.92□□□□□ -0.82
MCF2-209ENST00000520602 ABRAXAS1Q6UWZ7 409 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 ANKRD33Q7Z3H0 272 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 LILRA2Q8N149 483 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 MINDY1Q8N5J2 469 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 ZNF483Q8TF39 744 aaPredicted RBP9.92□□□□□ -0.82
MCF2-209ENST00000520602 DGCR14Q96DF8 476 aaKnown RBP9.92□□□□□ -0.82
MCF2-209ENST00000520602 SLC29A1Q99808 456 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 SH3GL3Q99963 347 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 SMPD3Q9NY59 655 aaPredicted RBP9.92□□□□□ -0.82
MCF2-209ENST00000520602 SLC13A4Q9UKG4 626 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 GPR45Q9Y5Y3 372 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 CFAP20Q9Y6A4 193 aaKnown RBP9.92□□□□□ -0.82
MCF2-209ENST00000520602 SYNDIG1LA6NDD5 238 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 PLK4O00444 970 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 CXCR6O00574 342 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 OR6B1O95007 311 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 NFATC1O95644 943 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 CXCL10P02778 98 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 CYP4B1P13584 511 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 HPCAL1P37235 193 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 LAPTM5Q13571 262 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 CPTPQ5TA50 214 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 ANKRD26P1Q6NSI1 321 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 CACYBPQ9HB71 228 aaKnown RBP9.92□□□□□ -0.82
MCF2-209ENST00000520602 IL23AQ9NPF7 189 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 PDE10AQ9Y233 779 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 ANKDD1BA6NHY2 528 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 NOBOXO60393 691 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 PRKD3O94806 890 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 PDYNP01213 254 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 CCR7P32248 378 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 SLC7A9P82251 487 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 TMEM115Q12893 351 aaPredicted RBP9.91□□□□□ -0.82
MCF2-209ENST00000520602 AGTRAPQ6RW13 159 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 GALNT5Q7Z7M9 940 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 HOMEZQ8IX15 550 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 SLC22A15Q8IZD6 547 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 AADATQ8N5Z0 425 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 OR2T11Q8NH01 316 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 GATA6Q92908 595 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 RHBDF1Q96CC6 855 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 TEX37Q96LM6 180 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 OSBPL6Q9BZF3 934 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 TMEM181Q9P2C4 612 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 HSFX1Q9UBD0 423 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 INTS6Q9UL03 887 aaKnown RBP9.91□□□□□ -0.82
MCF2-209ENST00000520602 H3BNX3 289 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 UMPSP11172 480 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 PRPS2P11908 318 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 BCKDHAP12694 445 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 POU1F1P28069 291 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 P3H2Q8IVL5 708 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 GLB1L3Q8NCI6 653 aaPredicted RBP9.91□□□□□ -0.82
MCF2-209ENST00000520602 BPIFB6Q8NFQ5 453 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 LZICQ8WZA0 190 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 REPS1Q96D71 796 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 ZSCAN5AQ9BUG6 496 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 DGCR6LQ9BY27 220 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 IL21Q9HBE4 155 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 MAP10Q9P2G4 905 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 USP22Q9UPT9 525 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 PCCBP05166 539 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 CBSLP0DN79 551 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 CBSP35520 551 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 BMPR1AP36894 532 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 YAP1P46937 504 aaKnown RBP9.91□□□□□ -0.82
MCF2-209ENST00000520602 GK3PQ14409 553 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 PCBP2Q15366 365 aaKnown RBP eCLIP9.91□□□□□ -0.82
MCF2-209ENST00000520602 CNPY1Q3B7I2 92 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 NADK2Q4G0N4 442 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 LDLRAP1Q5SW96 308 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 THOC6Q86W42 341 aaKnown RBP9.91□□□□□ -0.82
MCF2-209ENST00000520602 ZC3H7AQ8IWR0 971 aaKnown RBP9.91□□□□□ -0.82
MCF2-209ENST00000520602 C8orf59Q8N0T1 100 aaPredicted RBP9.91□□□□□ -0.82
MCF2-209ENST00000520602 HPS4Q9NQG7 708 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 CCM2LQ9NUG4 571 aaPredicted RBP9.91□□□□□ -0.82
MCF2-209ENST00000520602 TBX21Q9UL17 535 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 CEP350Q5VT06 3117 aa9.91□□□□□ -0.82
MCF2-209ENST00000520602 HTRA2O43464 458 aaPredicted RBP9.9□□□□□ -0.82
MCF2-209ENST00000520602 MATN4O95460 622 aa9.9□□□□□ -0.82
MCF2-209ENST00000520602 SERPINA1P01009 418 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms