RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 MED4Q9NPJ6 270 aa17.29■□□□□ 0.36
SDC2-205ENST00000520233 UTP6Q9NYH9 597 aaKnown RBP17.29■□□□□ 0.36
SDC2-205ENST00000520233 NUDT4Q9NZJ9 180 aa17.29■□□□□ 0.36
SDC2-205ENST00000520233 SPATA7Q9P0W8 599 aa17.29■□□□□ 0.36
SDC2-205ENST00000520233 USP34Q70CQ2 3546 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 EME2A4GXA9 379 aaPredicted RBP17.28■□□□□ 0.36
SDC2-205ENST00000520233 SUPT3HB4E1H0 165 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 TK2O00142 265 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 SH3BP5O60239 455 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 GFRA3O60609 400 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 SUPT3HO75486 399 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 LDOC1O95751 146 aaPredicted RBP17.28■□□□□ 0.36
SDC2-205ENST00000520233 ANXA5P08758 320 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 SBK3P0C264 359 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 MYF5P13349 255 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 MTHFD2P13995 350 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 PNLIPP16233 465 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 HSD17B2P37059 387 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 GPS2Q13227 327 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 NR1D2Q14995 579 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 ARHGAP19Q14CB8 494 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 HSP90B2PQ58FF3 399 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 BAHD1Q8TBE0 780 aaPredicted RBP17.28■□□□□ 0.36
SDC2-205ENST00000520233 LCN9Q8WX39 176 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 NAT6Q93015 286 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 CNDP2Q96KP4 475 aaKnown RBP17.28■□□□□ 0.36
SDC2-205ENST00000520233 SLC38A3Q99624 504 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 EGFL8Q99944 293 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 MENTQ9BUN1 341 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 RAB11FIP5Q9BXF6 653 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 KCNK9Q9NPC2 374 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 ARL15Q9NXU5 204 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 CD274Q9NZQ7 290 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 CPSF2Q9P2I0 782 aaKnown RBP17.28■□□□□ 0.36
SDC2-205ENST00000520233 SLC17A7Q9P2U7 560 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 CIDEBQ9UHD4 219 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 LNPEPQ9UIQ6 1025 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 TMCO1Q9UM00 188 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 PLAGL1Q9UM63 463 aa17.28■□□□□ 0.36
SDC2-205ENST00000520233 ARHGEF17Q96PE2 2063 aaPredicted RBP17.27■□□□□ 0.36
SDC2-205ENST00000520233 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.27■□□□□ 0.36
SDC2-205ENST00000520233 FAM221BA6H8Z2 402 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 KRT87PA6NCN2 255 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 UBXN8O00124 270 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 TM9SF1O15321 606 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 KLK8O60259 260 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 CBFA2T3O75081 653 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 GUCA1CO95843 209 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 S100BP04271 92 aaPredicted RBP17.27■□□□□ 0.36
SDC2-205ENST00000520233 ERGP11308 486 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 CKMT2P17540 419 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 TAC1P20366 129 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 PKLRP30613 574 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 SHMT2P34897 504 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 RPA3P35244 121 aaPredicted RBP17.27■□□□□ 0.36
SDC2-205ENST00000520233 GPR3P46089 330 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 RAB28P51157 221 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 SLC18A1P54219 525 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 EPHA4P54764 986 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 DAB2P98082 770 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 PLCL1Q15111 1095 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 PDPRQ8NCN5 879 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 RDH11Q8TC12 318 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 DENND1AQ8TEH3 1009 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 ZNF480Q8WV37 535 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 ATL1Q8WXF7 558 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 EXT2Q93063 718 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 RHBDF1Q96CC6 855 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 FBXL8Q96CD0 374 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 C12orf65Q9H3J6 166 aaKnown RBP17.27■□□□□ 0.36
SDC2-205ENST00000520233 STOX2Q9P2F5 926 aaPredicted RBP17.27■□□□□ 0.36
SDC2-205ENST00000520233 FTSJ1Q9UET6 329 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 MID2Q9UJV3 735 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 ICKQ9UPZ9 632 aa17.27■□□□□ 0.36
SDC2-205ENST00000520233 OTOGLQ3ZCN5 2332 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 COL5A1P20908 1838 aaPredicted RBP17.26■□□□□ 0.35
SDC2-205ENST00000520233 CPED1A4D0V7 1026 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 NCF1BA6NI72 391 aaPredicted RBP17.26■□□□□ 0.35
SDC2-205ENST00000520233 ZNF839A8K0R7 811 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 NCF1CA8MVU1 366 aaPredicted RBP17.26■□□□□ 0.35
SDC2-205ENST00000520233 SMIM24O75264 130 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 ZWINTO95229 277 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 SLC16A8O95907 504 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 NCF1P14598 390 aaPredicted RBP17.26■□□□□ 0.35
SDC2-205ENST00000520233 IMPA1P29218 277 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 HNMTP50135 292 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 MPP2Q14168 576 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 CYP2A13Q16696 494 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 ANKS6Q68DC2 871 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 SULT1C3Q6IMI6 304 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 GUSBP11Q6P575 273 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 MBOAT1Q6ZNC8 495 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 PIP4P1Q86T03 277 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 AMIGO1Q86WK6 493 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 ZNF761Q86XN6 746 aaPredicted RBP17.26■□□□□ 0.35
SDC2-205ENST00000520233 TCAIMQ8N3R3 496 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 CCDC63Q8NA47 563 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 ARMC2Q8NEN0 867 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 OR4E2Q8NGC2 313 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 OR2L8Q8NGY9 312 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms