RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 AP1M2Q9Y6Q5 423 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 SHANK1Q9Y566 2161 aa12□□□□□ -0.49
CSMD1-205ENST00000519623 SPTAN1Q13813 2472 aaKnown RBP12□□□□□ -0.49
CSMD1-205ENST00000519623 UTP20O75691 2785 aaKnown RBP11.99□□□□□ -0.49
CSMD1-205ENST00000519623 A0A0J9YY10 115 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 TTLL8A6PVC2 850 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 IQCF5A8MTL0 148 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 ZNF185O15231 689 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 APRTP07741 180 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 ZSCAN5DPP0CG00 497 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 RPL22P35268 128 aaKnown RBP11.99□□□□□ -0.49
CSMD1-205ENST00000519623 CSE1LP55060 971 aaKnown RBP11.99□□□□□ -0.49
CSMD1-205ENST00000519623 HSPA14Q0VDF9 509 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 ATP1A4Q13733 1029 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 GRB7Q14451 532 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 SSPNQ14714 243 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 KIR2DS3Q14952 304 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 SLC5A12Q1EHB4 618 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 DEFB110Q30KQ9 67 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 SYTL3Q4VX76 610 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 FASTKD1Q53R41 847 aaKnown RBP11.99□□□□□ -0.49
CSMD1-205ENST00000519623 DNAJC21Q5F1R6 531 aaKnown RBP11.99□□□□□ -0.49
CSMD1-205ENST00000519623 SEL1L2Q5TEA6 688 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 MED25Q71SY5 747 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 LDB1Q86U70 411 aaPredicted RBP11.99□□□□□ -0.49
CSMD1-205ENST00000519623 HOOK3Q86VS8 718 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 ATCAYQ86WG3 371 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 FAM20CQ8IXL6 584 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 FAM26EQ8N5C1 309 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 TMEM102Q8N9M5 508 aaPredicted RBP11.99□□□□□ -0.49
CSMD1-205ENST00000519623 LMNTD1Q8N9Z9 388 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 LINC01555Q8NAE3 123 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 LKAAEAR1Q8TD35 194 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 PEX13Q92968 403 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 DHRS4Q9BTZ2 278 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 NUDT9Q9BW91 350 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 CHRAC1Q9NRG0 131 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 GUCA1BQ9UMX6 200 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 ZNF451Q9Y4E5 1061 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 MAP4K5Q9Y4K4 846 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 ESPL1Q14674 2120 aa11.99□□□□□ -0.49
CSMD1-205ENST00000519623 SPTBN1Q01082 2364 aaKnown RBP11.98□□□□□ -0.49
CSMD1-205ENST00000519623 A6NL46 340 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 ISM1B1AKI9 464 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 C9J4A7 227 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 E7EVH7 732 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 F8W8V4 182 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 CNOT3O75175 753 aaKnown RBP11.98□□□□□ -0.49
CSMD1-205ENST00000519623 SORBS2O94875 1100 aaKnown RBP11.98□□□□□ -0.49
CSMD1-205ENST00000519623 SLCO2B1O94956 709 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 AOAHP28039 575 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 PKLRP30613 574 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 PPARGP37231 505 aaPredicted RBP11.98□□□□□ -0.49
CSMD1-205ENST00000519623 GCGRP47871 477 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 RAB28P51157 221 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 RRADP55042 308 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 DCDP81605 110 aaKnown RBP11.98□□□□□ -0.49
CSMD1-205ENST00000519623 CCNG2Q16589 344 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 PCID2Q5JVF3 399 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 MEI1Q5TIA1 1274 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 C1orf189Q5VU69 101 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 MLIPQ5VWP3 458 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 TLDC1Q6P9B6 456 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 TMEM151BQ8IW70 566 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 ZNF655Q8N720 491 aaPredicted RBP11.98□□□□□ -0.49
CSMD1-205ENST00000519623 RBMXL3Q8N7X1 1067 aaKnown RBP11.98□□□□□ -0.49
CSMD1-205ENST00000519623 CPT1CQ8TCG5 803 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 ASZ1Q8WWH4 475 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 N4BP2L2Q92802 583 aaPredicted RBP11.98□□□□□ -0.49
CSMD1-205ENST00000519623 PSMG3-AS1Q96PY0 264 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 PAK5Q9P286 719 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 MARCH4Q9P2E8 410 aaPredicted RBP11.98□□□□□ -0.49
CSMD1-205ENST00000519623 DHCR7Q9UBM7 475 aaKnown RBP11.98□□□□□ -0.49
CSMD1-205ENST00000519623 PLCL2Q9UPR0 1127 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 DRG1Q9Y295 367 aaKnown RBP11.98□□□□□ -0.49
CSMD1-205ENST00000519623 KLHL20Q9Y2M5 609 aa11.98□□□□□ -0.49
CSMD1-205ENST00000519623 ICE1Q9Y2F5 2266 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 PRMT5O14744 637 aaPredicted RBP11.97□□□□□ -0.49
CSMD1-205ENST00000519623 CD3EAPO15446 510 aaKnown RBP11.97□□□□□ -0.49
CSMD1-205ENST00000519623 ZSCAN9O15535 394 aaPredicted RBP11.97□□□□□ -0.49
CSMD1-205ENST00000519623 KRT86O43790 486 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 PRICKLE3O43900 615 aaPredicted RBP11.97□□□□□ -0.49
CSMD1-205ENST00000519623 KDM1AO60341 852 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 MAGP20916 626 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 CD9P21926 228 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 OTX2P32243 289 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 UQCRFS1P47985 274 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 PRAMEP78395 509 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 RPS6KA1Q15418 735 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 NKAIN1Q4KMZ8 207 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 JMJD6Q6NYC1 403 aaPredicted RBP11.97□□□□□ -0.49
CSMD1-205ENST00000519623 MRPL14Q6P1L8 145 aaKnown RBP11.97□□□□□ -0.49
CSMD1-205ENST00000519623 DRICH1Q6PGQ1 229 aaPredicted RBP11.97□□□□□ -0.49
CSMD1-205ENST00000519623 RAB43Q86YS6 212 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 MCATQ8IVS2 390 aaKnown RBP11.97□□□□□ -0.49
CSMD1-205ENST00000519623 KRT222Q8N1A0 295 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 C2orf73Q8N5S3 287 aaPredicted RBP11.97□□□□□ -0.49
CSMD1-205ENST00000519623 CCDC89Q8N998 374 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 Q8NA96 180 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 GALNT11Q8NCW6 608 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms