RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 LRRC66Q68CR7 880 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 VASNQ6EMK4 673 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 TXNRD3NBQ6F5E7 133 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 RWDD4Q6NW29 188 aaKnown RBP6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 FAM83HQ6ZRV2 1179 aaPredicted RBP6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 SEM1Q6ZVN7 128 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 ADGRG6Q86SQ4 1221 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 ZNF227Q86WZ6 799 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 OR5M9Q8NGP3 310 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 OR5M3Q8NGP4 307 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 RNASE6Q93091 150 aaKnown RBP6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 ZBED6CLQ96FA7 236 aaPredicted RBP6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 MEGF10Q96KG7 1140 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 CCL19Q99731 98 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 LLPHQ9BRT6 129 aaKnown RBP6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 SARGQ9BW04 601 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 PITPNM3Q9BZ71 974 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 RBSNQ9H1K0 784 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 CARD9Q9H257 536 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 SLC26A1Q9H2B4 701 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 WDR54Q9H977 334 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 COQ4Q9Y3A0 265 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 CFAP20Q9Y6A4 193 aaKnown RBP6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 CPAMD8Q8IZJ3 1885 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 A0A096LNT2 108 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 TUBAL3A6NHL2 446 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 EIF3CLB5ME19 914 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 BTN3A3O00478 584 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 TMPRSS2O15393 492 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 OR2B3O76000 313 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 MED26O95402 600 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 MLYCDO95822 493 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 CD63P08962 238 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 PDIA4P13667 645 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 PAX1P15863 534 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 ITGA2P17301 1181 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 CDH3P22223 829 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 EEF1DP29692 281 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 PRDX3P30048 256 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 COMPP49747 757 aaPredicted RBP6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 POLR2LP62875 67 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 FASTKQ14296 549 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 IHHQ14623 411 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 ACKR1Q16570 336 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 HYAL4Q2M3T9 481 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 ATP13A4Q4VNC1 1196 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 TDRD12Q587J7 1177 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 GPRC6AQ5T6X5 926 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 CCDC73Q6ZRK6 1079 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 UNC13DQ70J99 1090 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 NDUFAF7Q7L592 441 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 SLC26A9Q7LBE3 791 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 TRIM73Q86UV7 250 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 PAQR7Q86WK9 346 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 PRSS58Q8IYP2 241 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 CARFQ8N187 725 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 NAXEQ8NCW5 288 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 GOLGA5Q8TBA6 731 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 FKBP10Q96AY3 582 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 SCRN2Q96FV2 425 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 EIF3CQ99613 913 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 C7orf25Q9BPX7 421 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 MRPL18Q9H0U6 180 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 ATG10Q9H0Y0 220 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 ZNF696Q9H7X3 374 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 MRM3Q9HC36 420 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 SYTL2Q9HCH5 934 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 KCTD5Q9NXV2 234 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 TAS2R14Q9NYV8 317 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 UBA2Q9UBT2 640 aaPredicted RBP6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 PSMD13Q9UNM6 376 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 CLIC4Q9Y696 253 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 DNAJC13O75165 2243 aa6.41□□□□□ -1.38
CTNNA1-216ENST00000519489 IGHV1-45A0A0A0MS14 117 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 NSG1A0A0A6YYJ2 146 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 A0A1W2PQ72 361 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 FAM170AA1A519 330 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 USP27XA6NNY8 438 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 KDM4EB2RXH2 506 aaPredicted RBP6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 GOLGA8SH3BPF8 625 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 J3QW42 95 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 PDXKO00764 312 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 ZSCAN9O15535 394 aaPredicted RBP6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 KLRC4O43908 158 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 HS6ST1O60243 411 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 CDC40O60508 579 aaKnown RBP eCLIP6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 PRAMEF11O60813 436 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 MTX2O75431 263 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 CPP00450 1065 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 SP1P08047 785 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 PDHA1P08559 390 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 SOX5P35711 763 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 FLT3P36888 993 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 NSG1P42857 185 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 STC1P52823 247 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 KLC1Q07866 573 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 STILQ15468 1287 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 INSCQ1MX18 579 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 FBXL19-AS1Q494R0 122 aa6.4□□□□□ -1.38
CTNNA1-216ENST00000519489 HENMT1Q5T8I9 393 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms