RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 SNX1Q13596 522 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 SPA17Q15506 151 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 PARP6Q2NL67 630 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 TSTD2Q5T7W7 516 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 CCDC181Q5TID7 509 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 IZUMO3Q5VZ72 239 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 ZDHHC20Q5W0Z9 365 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 PAPD7Q5XG87 772 aaKnown RBP8.34□□□□□ -1.07
PABPC1-202ENST00000517403 SPESP1Q6UW49 350 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 PACS1Q6VY07 963 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 TAS2R42Q7RTR8 314 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 SYVN1Q86TM6 617 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 AMIGO1Q86WK6 493 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 C19orf47Q8N9M1 422 aaKnown RBP8.34□□□□□ -1.07
PABPC1-202ENST00000517403 DENND1AQ8TEH3 1009 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 LCN9Q8WX39 176 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 TFGQ92734 400 aaPredicted RBP8.34□□□□□ -1.07
PABPC1-202ENST00000517403 HDAC10Q969S8 669 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 C19orf60Q96EN9 201 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 GBP5Q96PP8 586 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 PSMG3-AS1Q96PY0 264 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 SRMSQ9H3Y6 488 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 TFB2MQ9H5Q4 396 aaKnown RBP8.34□□□□□ -1.07
PABPC1-202ENST00000517403 PDE7BQ9NP56 450 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 CASS4Q9NQ75 786 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 KCND1Q9NSA2 647 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 SMARCAL1Q9NZC9 954 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 IL1RAPL1Q9NZN1 696 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 STOX2Q9P2F5 926 aaPredicted RBP8.34□□□□□ -1.07
PABPC1-202ENST00000517403 ANAPC2Q9UJX6 822 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 KCND3Q9UK17 655 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 TCFL5Q9UL49 500 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 ACSL5Q9ULC5 683 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 C17orf113A0A1B0GUU1 675 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 A0A1W2PPV9 198 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 BLACEA4D250 179 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 MAST4O15021 2626 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 PRICKLE3O43900 615 aaPredicted RBP8.33□□□□□ -1.08
PABPC1-202ENST00000517403 CTSVO60911 334 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 SUN1O94901 812 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 CRTAMO95727 393 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 MSL3P1P0C860 447 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 SFTPCP11686 197 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 MAGP20916 626 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 NMBRP28336 390 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 RPL22P35268 128 aaKnown RBP8.33□□□□□ -1.08
PABPC1-202ENST00000517403 CCL11P51671 97 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 CACNG1Q06432 222 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 KLRB1Q12918 225 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 UBAP2LQ14157 1087 aaKnown RBP8.33□□□□□ -1.08
PABPC1-202ENST00000517403 NCF4Q15080 339 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 CTSL3PQ5NE16 218 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 SLC6A19Q695T7 634 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 FCRL6Q6DN72 434 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 CES3Q6UWW8 571 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 ARHGEF18Q6ZSZ5 1173 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 PEX26Q7Z412 305 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 PPP1R32Q7Z5V6 425 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 MRGPREQ86SM8 312 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 ATCAYQ86WG3 371 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 TMTC1Q8IUR5 882 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 MPP5Q8N3R9 675 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 DNAJC22Q8N4W6 341 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 ELMO1Q92556 727 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 DOCK10Q96BY6 2186 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 ULK4Q96C45 1275 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 TCTN2Q96GX1 697 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 LRFN5Q96NI6 719 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 RANBP9Q96S59 729 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 SLC30A3Q99726 388 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 BAG1Q99933 345 aaPredicted RBP8.33□□□□□ -1.08
PABPC1-202ENST00000517403 ING2Q9H160 280 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 P2RY12Q9H244 342 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 LRRC40Q9H9A6 602 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 ACTR5Q9H9F9 607 aaPredicted RBP8.33□□□□□ -1.08
PABPC1-202ENST00000517403 C1GALT1Q9NS00 363 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 TREX1Q9NSU2 369 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 FARSAQ9Y285 508 aaKnown RBP8.33□□□□□ -1.08
PABPC1-202ENST00000517403 MED16Q9Y2X0 877 aa8.33□□□□□ -1.08
PABPC1-202ENST00000517403 AAR2Q9Y312 384 aaKnown RBP8.33□□□□□ -1.08
PABPC1-202ENST00000517403 ZNF185O15231 689 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 GPC4O75487 556 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 TMEM63AO94886 807 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 TJP3O95049 919 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 KCNJ1P48048 391 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 Q0VFX4 171 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 GPR33Q49SQ1 333 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 CRB2Q5IJ48 1285 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 ANKRD22Q5VYY1 191 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 TTC27Q6P3X3 843 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 KIAA1328Q86T90 577 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 SLC13A5Q86YT5 568 aaPredicted RBP8.32□□□□□ -1.08
PABPC1-202ENST00000517403 ZNF655Q8N720 491 aaPredicted RBP8.32□□□□□ -1.08
PABPC1-202ENST00000517403 GIMAP7Q8NHV1 300 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 STYXQ8WUJ0 223 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 ZFPM2Q8WW38 1151 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 FAM136AQ96C01 138 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 DCUN1D1Q96GG9 259 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 C19orf43Q9BQ61 176 aa8.32□□□□□ -1.08
PABPC1-202ENST00000517403 AP1M1Q9BXS5 423 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms