RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 SRPX2O60687 465 aaPredicted RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ENTPD3O75355 529 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KHDRBS3O75525 346 aaKnown RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 GFPT2O94808 682 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 AP2A2O94973 939 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 NDUFB4O95168 129 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CELF2O95319 508 aaKnown RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 RENP00797 406 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 IGHV4-59P01825 116 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 IGHEP01854 428 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 C9P02748 559 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SERPING1P05155 500 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 HOXD4P09016 255 aaPredicted RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ANKRD34CP0C6C1 535 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MYZAPP0CAP1 466 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SLC35E2P0CK97 266 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 HSPA1AP0DMV8 641 aaKnown RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 HSPA1BP0DMV9 641 aaKnown RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 EEF2P13639 858 aaKnown RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 DAOP14920 347 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CPN1P15169 458 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 B4GALT1P15291 398 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CSF2RAP15509 400 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZNF182P17025 639 aaPredicted RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZNF32P17041 273 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 GOT1P17174 413 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 RPL17P18621 184 aaKnown RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TRIM21P19474 475 aaKnown RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 AOC1P19801 751 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 GCH1P30793 250 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CDAP32320 146 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MC5RP33032 325 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ABCD1P33897 745 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 IL15P40933 162 aaPredicted RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PAFAH1B1P43034 410 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 GRK6P43250 576 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CCR10P46092 362 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CRKLP46109 303 aaKnown RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 RPL21P46778 160 aaKnown RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 POU3F4P49335 361 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CDK7P50613 346 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CCR9P51686 369 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ADARP55265 1226 aaKnown RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PAX9P55771 341 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 RAG2P55895 527 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ARL4CP56559 192 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TAS2R40P59535 323 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ERVPABLB-1P60509 514 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 RPS27AP62979 156 aaKnown RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 OLR1P78380 273 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MPP1Q00013 466 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KHDRBS1Q07666 443 aaKnown RBP eCLIP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 LMOD3Q0VAK6 560 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 BIRC2Q13490 618 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ACVR2BQ13705 512 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MORC3Q14149 939 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KRT81Q14533 505 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 DHX8Q14562 1220 aaKnown RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 HERPUD1Q15011 391 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 GPR68Q15743 365 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZKSCAN8Q15776 578 aaPredicted RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZNF79Q15937 498 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TAZQ16635 292 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 DUSP5Q16690 384 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 GRAMD1BQ3KR37 738 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 UGT3A2Q3SY77 523 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SYT14P1Q58G82 188 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MDH1BQ5I0G3 518 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SLC25A30Q5SVS4 291 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KHDRBS2Q5VWX1 349 aaKnown RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZDHHC20Q5W0Z9 365 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CCSAPQ6IQ19 270 aaPredicted RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PLEKHA7Q6IQ23 1121 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 METTL2BQ6P1Q9 378 aaKnown RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KLC3Q6P597 504 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZNF613Q6PF04 617 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KLHL35Q6PF15 583 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KRBA2Q6ZNG9 492 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SEPT14Q6ZU15 432 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TMPRSS11FQ6ZWK6 438 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CHST9Q7L1S5 443 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ISCA2Q86U28 154 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 RPAINQ86UA6 219 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TSPAN33Q86UF1 283 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SLC25A42Q86VD7 318 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 COMMD2Q86X83 199 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CDC20BQ86Y33 519 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 HIPK1Q86Z02 1210 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TICAM1Q8IUC6 712 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 WDR49Q8IV35 697 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TIGD4Q8IY51 512 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 DIS3L2Q8IYB7 885 aaKnown RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PM20D2Q8IYS1 436 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TDHQ8IZJ6 230 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CPSF7Q8N684 471 aaKnown RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PAF1Q8N7H5 531 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZNF433Q8N7K0 673 aaPredicted RBP0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZNF611Q8N823 705 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TRIML1Q8N9V2 468 aa0.2□□□□□ -2.38
RNU6-1049P-201ENST00000516414 L3MBTL4Q8NA19 623 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms