RNA–Protein interactions for RNA: ENST00000516098.1

RNU6-240P-201, Transcript of RNA, U6 small nuclear 240, pseudogene, humanhuman

BASIC

Gene RNU6-240P, Length 97 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-240P-201ENST00000516098 HIST1H2ABP04908 130 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 IFIT2P09913 472 aaKnown RBP0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 HIST1H2ADP20671 130 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 GIFP27352 417 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 ELK3P41970 407 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 CTCFP49711 727 aaPredicted RBP0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 KHKP50053 298 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 ZNF133P52736 654 aaPredicted RBP0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 EIF3BP55884 814 aaKnown RBP0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 MAZP56270 477 aaKnown RBP0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 PLA2G7Q13093 441 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 ZNF177Q13360 481 aaPredicted RBP0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 NAB2Q15742 525 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 TAB1Q15750 504 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 SPECC1Q5M775 1068 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 FBXO47Q5MNV8 452 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 CELF3Q5SZQ8 465 aaKnown RBP0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 LINC00242Q5T6M2 205 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 LCN1P1Q5VSP4 162 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 AGAP7PQ5VUJ5 663 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 TMUB2Q71RG4 321 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 HIST3H2AQ7L7L0 130 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 CEP97Q8IW35 865 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 ENTHD1Q8IYW4 607 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 TDRD5Q8NAT2 981 aaKnown RBP0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 OR8K5Q8NH50 307 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 OR52N5Q8NH56 324 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 C9orf43Q8TAL5 461 aaPredicted RBP0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 HERVK_113Q902F9 699 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 SAAL1Q96ER3 474 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 CCDC136Q96JN2 1154 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 SPAG5Q96R06 1193 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 NUDCD1Q96RS6 583 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 SLC22A12Q96S37 553 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 APOL2Q9BQE5 337 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 PYM1Q9BRP8 204 aaKnown RBP0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 UBAC1Q9BSL1 405 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 NUP85Q9BW27 656 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 HHATLQ9HCP6 504 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 CYTL1Q9NRR1 136 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 GEMIN8Q9NWZ8 242 aaKnown RBP0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 P4HTMQ9NXG6 502 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 SPHK1Q9NYA1 384 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 IL17CQ9P0M4 197 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 PA2G4Q9UQ80 394 aaKnown RBP0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 HIVEP2P31629 2446 aa0.67□□□□□ -2.3
RNU6-240P-201ENST00000516098 ARID1AO14497 2285 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 KIR2DL5BA0A0G2JN68 375 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 KIR2DL5BA0A0G2JPC4 375 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 TMEM8BA6NDV4 472 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 ERVV-1B6SEH8 477 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 E7ENQ6 273 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 F5H423 210 aaPredicted RBP0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 MAGEB4O15481 346 aaPredicted RBP0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 FAM200BP0CF97 657 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 PRKAR1AP10644 381 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 PCP11498 1178 aaKnown RBP0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 MSH2P43246 934 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 HTR3AP46098 478 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 RPL21P46778 160 aaKnown RBP0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 PRELPP51888 382 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 F2RL1P55085 397 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 UBE3AQ05086 875 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 SQLEQ14534 574 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 ZNF74Q16587 644 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 SLC25A53Q5H9E4 307 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 MDH1BQ5I0G3 518 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 GRTP1Q5TC63 336 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 MARC1Q5VT66 337 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 C3P1Q6ZMU1 363 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 KIR2DL5AQ8N109 375 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 C4orf32Q8N8J7 132 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 OR10G7Q8NGN6 311 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 RNF128Q8TEB7 428 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 POF1BQ8WVV4 589 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 APOBEC4Q8WW27 367 aaKnown RBP0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 MMABQ96EY8 250 aaPredicted RBP0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 CNRIP1Q96F85 164 aaPredicted RBP0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 CHRDL1Q9BU40 450 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 THAP2Q9H0W7 228 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 RANGRFQ9HD47 186 aaPredicted RBP0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 ZNF701Q9NV72 531 aaPredicted RBP0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 NPAP1Q9NZP6 1156 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 ZNF69Q9UC07 566 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 LNPEPQ9UIQ6 1025 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 TSPYL4Q9UJ04 414 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 SARDHQ9UL12 918 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 PLEKHA6Q9Y2H5 1048 aa0.66□□□□□ -2.3
RNU6-240P-201ENST00000516098 GAKO14976 1311 aa0.65□□□□□ -2.3
RNU6-240P-201ENST00000516098 hCG_1642624A0A1W2PR95 340 aa0.65□□□□□ -2.31
RNU6-240P-201ENST00000516098 NDUFS4O43181 175 aa0.65□□□□□ -2.31
RNU6-240P-201ENST00000516098 HCRTR2O43614 444 aa0.65□□□□□ -2.31
RNU6-240P-201ENST00000516098 NDUFS3O75489 264 aa0.65□□□□□ -2.31
RNU6-240P-201ENST00000516098 PRDM1O75626 825 aa0.65□□□□□ -2.31
RNU6-240P-201ENST00000516098 TRUB2O95900 331 aaKnown RBP0.65□□□□□ -2.31
RNU6-240P-201ENST00000516098 RENP00797 406 aa0.65□□□□□ -2.31
RNU6-240P-201ENST00000516098 ACTN1P12814 892 aa0.65□□□□□ -2.31
RNU6-240P-201ENST00000516098 SERPINB3P29508 390 aa0.65□□□□□ -2.31
RNU6-240P-201ENST00000516098 PTGER4P35408 488 aa0.65□□□□□ -2.31
RNU6-240P-201ENST00000516098 GPR143P51810 404 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms