RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 PMS2CLQ68D20 193 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 CFAP77Q6ZQR2 320 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 MSANTD1Q6ZTZ1 278 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 STRCQ7RTU9 1775 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 PIWIL3Q7Z3Z3 882 aaKnown RBP3.06□□□□□ -1.92
HERC4-215ENST00000515753 SLC9B2Q86UD5 537 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 MCEMP1Q8IX19 187 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 PM20D2Q8IYS1 436 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 C10orf53Q8N6V4 93 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 TSPAN14Q8NG11 270 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 OR13A1Q8NGR1 328 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 PTP4A1Q93096 173 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 HDAC11Q96DB2 347 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 TBC1D31Q96DN5 1066 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 ELMOD3Q96FG2 381 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 ERO1AQ96HE7 468 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 PGLYRP2Q96PD5 576 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 ERBINQ96RT1 1412 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 SRSF8Q9BRL6 282 aaKnown RBP3.06□□□□□ -1.92
HERC4-215ENST00000515753 NAA11Q9BSU3 229 aaPredicted RBP3.06□□□□□ -1.92
HERC4-215ENST00000515753 TRMT61BQ9BVS5 477 aaKnown RBP3.06□□□□□ -1.92
HERC4-215ENST00000515753 TMEM39BQ9GZU3 492 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 PLK3Q9H4B4 646 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 KIF15Q9NS87 1388 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 TRMT1Q9NXH9 659 aaKnown RBP3.06□□□□□ -1.92
HERC4-215ENST00000515753 CNOT8Q9UFF9 292 aaKnown RBP3.06□□□□□ -1.92
HERC4-215ENST00000515753 PA2G4Q9UQ80 394 aaKnown RBP3.06□□□□□ -1.92
HERC4-215ENST00000515753 LIPT1Q9Y234 373 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 KLHL20Q9Y2M5 609 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 MMP24Q9Y5R2 645 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 POMT1Q9Y6A1 747 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 KIDINS220Q9ULH0 1771 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 C3P01024 1663 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 DNMT1P26358 1616 aaKnown RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 MED1Q15648 1581 aaPredicted RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 ERVK-7P63135 1459 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 ARHGAP23Q9P227 1491 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 OR5K3A6NET4 321 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 EIF4E1BA6NMX2 242 aaKnown RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 H0YAE9 185 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 SMAD9O15198 467 aaKnown RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 ADAMDEC1O15204 470 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 EIF3DO15371 548 aaKnown RBP eCLIP3.05□□□□□ -1.92
HERC4-215ENST00000515753 SYNGR3O43761 229 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 ZG16O60844 167 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 C22orf31O95567 290 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 ATP1A1P05023 1023 aaKnown RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 ICAM1P05362 532 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 GM2AP17900 193 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 CASTP20810 708 aaKnown RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 CDKN1AP38936 164 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 RAB28P51157 221 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 CLCN3P51790 818 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 CTSCP53634 463 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 GALCP54803 685 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 RPL24P83731 157 aaKnown RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 AP1B1Q10567 949 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 IL11RAQ14626 422 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 MVPQ14764 893 aaKnown RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 TNIP1Q15025 636 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 NAB2Q15742 525 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 PARP10Q53GL7 1025 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 PDSS1Q5T2R2 415 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 STXBP5Q5T5C0 1151 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 FAM109BQ6ICB4 259 aaPredicted RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 CAVIN1Q6NZI2 390 aaKnown RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 ALKBH5Q6P6C2 394 aaKnown RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 CNSTQ6PJW8 725 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 ZNF852Q6ZMS4 543 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 TRMT1LQ7Z2T5 733 aaKnown RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 LMNTD2Q8IXW0 634 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 GUF1Q8N442 669 aaKnown RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 GCSAMQ8N6F7 178 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 TC2NQ8N9U0 490 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 KLHDC9Q8NEP7 349 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 SLC24A4Q8NFF2 622 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 DMBX1Q8NFW5 382 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 CTCFLQ8NI51 663 aaPredicted RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 FIBINQ8TAL6 211 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 PTPMT1Q8WUK0 201 aaPredicted RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 MRPS27Q92552 414 aaKnown RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 ZKSCAN4Q969J2 545 aaPredicted RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 EXOC4Q96A65 974 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 CCDC114Q96M63 670 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 PAFAH2Q99487 392 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 MLPHQ9BV36 600 aaPredicted RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 FUT8Q9BYC5 575 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 XPO4Q9C0E2 1151 aaKnown RBP3.05□□□□□ -1.92
HERC4-215ENST00000515753 ST6GALNAC4Q9H4F1 302 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 EPB41L5Q9HCM4 733 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 SETD4Q9NVD3 440 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 MTMR10Q9NXD2 777 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 GDE1Q9NZC3 331 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 COPG2Q9UBF2 871 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 CACNG4Q9UBN1 327 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 ODF2LQ9ULJ1 636 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 CMAHPQ9Y471 501 aa3.05□□□□□ -1.92
HERC4-215ENST00000515753 DEPDC5O75140 1603 aa3.04□□□□□ -1.92
HERC4-215ENST00000515753 MYO3AQ8NEV4 1616 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms