RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	KLK2	P20151	261 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	GCGR	P47871	477 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	PRLHR	P49683	370 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	PTPRCAP	Q14761	206 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	PDK2	Q15119	407 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	SLC5A12	Q1EHB4	618 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	SIRPB2	Q5JXA9	342 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	E4F1	Q66K89	784 aa	Predicted RBP	10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	TGIF2LY	Q8IUE0	185 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	PRSS58	Q8IYP2	241 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	DNAJC22	Q8N4W6	341 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	ACBD4	Q8NC06	268 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	ZNF398	Q8TD17	642 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	HAS2	Q92819	552 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	C8orf44	Q96CB5	159 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	FAF2	Q96CS3	445 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	DCUN1D1	Q96GG9	259 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	TMEM121	Q9BTD3	319 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	CHRNA10	Q9GZZ6	450 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	SLC26A1	Q9H2B4	701 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	OR52A5	Q9H2C5	316 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	COG4	Q9H9E3	785 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	GLOD4	Q9HC38	313 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	SPHK1	Q9NYA1	384 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	EURL	Q9NYK6	297 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	LIMA1	Q9UHB6	759 aa	Known RBP	10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	MYO6	Q9UM54	1294 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	MEMO1	Q9Y316	297 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	MRPS2	Q9Y399	296 aa	Known RBP	10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	ANKRD12	Q6UB98	2062 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620	ACAN	P16112	2415 aa		10.06	□□□□□ -0.8
CLDND1-231	ENST00000515620		A0A0A6YYK5	440 aa	Predicted RBP	10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	WDPCP	O95876	746 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	CHRM5	P08912	532 aa	Predicted RBP	10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	CDK11B	P21127	795 aa	Known RBP	10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	PDHA2	P29803	388 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	SHMT2	P34897	504 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	TNNT3	P45378	269 aa	Predicted RBP	10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	OR1D4	P47884	311 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	ARSF	P54793	590 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	WNT3A	P56704	352 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	PPP2R2A	P63151	447 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	FANCC	Q00597	558 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	BOP1	Q14137	746 aa	Known RBP	10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	CT47A1	Q5JQC4	288 aa	Predicted RBP	10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	UNC5A	Q6ZN44	842 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	NLRP9	Q7RTR0	991 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	TMEM200A	Q86VY9	491 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	MAP7D3	Q8IWC1	876 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	PLD5	Q8N7P1	536 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	FLVCR1-AS1	Q8TAF5	88 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	SUN3	Q8TAQ9	357 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	PSMF1	Q92530	271 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	NRGN	Q92686	78 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	TFG	Q92734	400 aa	Predicted RBP	10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	TREX2	Q9BQ50	279 aa	Predicted RBP	10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	THAP2	Q9H0W7	228 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	ISCU	Q9H1K1	167 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	GSX1	Q9H4S2	264 aa	Predicted RBP	10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	CUTC	Q9NTM9	273 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	HACD3	Q9P035	362 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	KLHL20	Q9Y2M5	609 aa		10.05	□□□□□ -0.8
CLDND1-231	ENST00000515620	NSG1	A0A0A6YYJ2	146 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	LOC285095	A0A1B0GVY8	99 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	FAM221A	A4D161	298 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	ISM1	B1AKI9	464 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	FAM227A	F5H4B4	570 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	MYO1F	O00160	1098 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	DSCR3	O14972	297 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	STX7	O15400	261 aa	Known RBP	10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	PRAMEF2	O60811	474 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	ONECUT2	O95948	504 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	CELA2A	P08217	269 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	RALB	P11234	206 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	FDXR	P22570	491 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	MCM3	P25205	808 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	DNAJA1	P31689	397 aa	Known RBP	10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	NSG1	P42857	185 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	TAS2R40	P59535	323 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	KLC1	Q07866	573 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	KLHL30	Q0D2K2	578 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	LONRF1	Q17RB8	773 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	TFDP3	Q5H9I0	405 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	CNST	Q6PJW8	725 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	KDELC1	Q6UW63	502 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	SPPL2C	Q8IUH8	684 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	DTWD1	Q8N5C7	304 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	CHDH	Q8NE62	594 aa	Predicted RBP	10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	OR5AR1	Q8NGP9	310 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	DENND1A	Q8TEH3	1009 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	CA5BP1	Q8WTZ4	195 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	ASB8	Q9H765	288 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	FAM153A	Q9UHL3	310 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	FKBPL	Q9UIM3	349 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	ZNF835	Q9Y2P0	537 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	ARL5A	Q9Y689	179 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	MAU2	Q9Y6X3	613 aa		10.04	□□□□□ -0.8
CLDND1-231	ENST00000515620	VSTM2B	A6NLU5	285 aa		10.03	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms