RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	PLXNA3	P51805	1871 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	DVL1P1	P54792	670 aa	Predicted RBP	4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	CCL23	P55773	120 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	SPAG1	Q07617	926 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	GOLGA8DP	Q0D2H9	430 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	SLC12A1	Q13621	1099 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	KRT31	Q15323	416 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	RALGAPA2	Q2PPJ7	1873 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	ASPRV1	Q53RT3	343 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	NLRC5	Q86WI3	1866 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	TEX11	Q8IYF3	940 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	IQUB	Q8NA54	791 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZNF485	Q8NCK3	441 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZNF397	Q8NF99	534 aa	Predicted RBP	4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	BEST2	Q8NFU1	509 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	CCDC12	Q8WUD4	166 aa	Predicted RBP	4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	ABTB1	Q969K4	478 aa	Predicted RBP	4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	CCDC51	Q96ER9	411 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	AK8	Q96MA6	479 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	TGS1	Q96RS0	853 aa	Known RBP	4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	REEP2	Q9BRK0	252 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	SH2D4A	Q9H788	454 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	MAGEE1	Q9HCI5	957 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	RMND1	Q9NWS8	449 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	TRMT1	Q9NXH9	659 aa	Known RBP	4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	RWDD2A	Q9UIY3	292 aa		4.25	□□□□□ -1.73
RUFY3-215	ENST00000515479	TECTA	O75443	2155 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	KMT2B	Q9UMN6	2715 aa	Predicted RBP	4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	CACNA1H	O95180	2353 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	PP2D1	A8MPX8	630 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZSCAN12	O43309	604 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	CNMD	O75829	334 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	CD4	P01730	458 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	RPN1	P04843	607 aa	Known RBP	4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	MYOG	P15173	224 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	S1PR1	P21453	382 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	SHMT1	P34896	483 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	NBL1	P41271	181 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	NAPA	P54920	295 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	SIGLEC14	Q08ET2	396 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	KARS	Q15046	597 aa	Known RBP	4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	NONO	Q15233	471 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	TCTN1	Q2MV58	587 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	HSP90AA4P	Q58FG1	418 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	GPATCH4	Q5T3I0	446 aa	Known RBP	4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	TRNP1	Q6NT89	227 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	TTI2	Q6NXR4	508 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	KCTD18	Q6PI47	426 aa	Predicted RBP	4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	RAD9B	Q6WBX8	426 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	SYT10	Q6XYQ8	523 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	KCTD8	Q6ZWB6	473 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	RNF113B	Q8IZP6	322 aa	Known RBP	4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	C1orf87	Q8N0U7	546 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	ADSSL1	Q8N142	457 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZCCHC9	Q8N567	271 aa	Known RBP	4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	KLHDC9	Q8NEP7	349 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	TNIP2	Q8NFZ5	429 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	NELFB	Q8WX92	580 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	CCT6B	Q92526	530 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	PABPC5	Q96DU9	382 aa	Known RBP	4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	BAG1	Q99933	345 aa	Predicted RBP	4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	RBM4	Q9BWF3	364 aa	Known RBP	4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	BLZF1	Q9H2G9	400 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	THAP9	Q9H5L6	903 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	RPAP3	Q9H6T3	665 aa	Predicted RBP	4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	DNAJC18	Q9H819	358 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	BPIFA1	Q9NP55	256 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	TMEM30A	Q9NV96	361 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	SWAP70	Q9UH65	585 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	FAF1	Q9UNN5	650 aa	Predicted RBP	4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	FAM96B	Q9Y3D0	163 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	EPG5	Q9HCE0	2579 aa		4.24	□□□□□ -1.73
RUFY3-215	ENST00000515479	ABCB11	O95342	1321 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	TRIM49B	A6NDI0	452 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	TMEM202	A6NGA9	273 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	KRTAP9-6	A8MVA2	160 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	MT-CYB	P00156	380 aa	Predicted RBP	4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	GH2	P01242	217 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	CCDC175	P0C221	793 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZNF883	P0CG24	379 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	GOLGA8H	P0CJ92	632 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	RNF224	P0DH78	156 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	AKR1B1	P15121	316 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	RRM1	P23921	792 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	PPP1R2	P41236	205 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	PRCP	P42785	496 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	NR0B1	P51843	470 aa	Known RBP	4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	HNRNPH2	P55795	449 aa	Known RBP	4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	STX17	P56962	302 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	EFNB1	P98172	346 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	PMP22	Q01453	160 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	ITGA7	Q13683	1181 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	MTF1	Q14872	753 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	MEA1	Q16626	185 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	SGO1	Q5FBB7	561 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	TCP11X2	Q5H9J9	407 aa		4.23	□□□□□ -1.73

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