RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 MYO10Q9HD67 2058 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 A0A1W2PP18 115 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 A0A1W2PQF6 199 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 FAM234BA2RU67 622 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 ANTXRLA6NF34 631 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 TMEM202A6NGA9 273 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 IGLON5A6NGN9 336 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 C10orf142B7Z368 130 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 MRASO14807 208 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 ADAM23O75077 832 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 ULK1O75385 1050 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 POP7O75817 140 aaKnown RBP8.15□□□□□ -1.1
RNF4-220ENST00000513578 RSL1D1O76021 490 aaKnown RBP8.15□□□□□ -1.1
RNF4-220ENST00000513578 C1orf105O95561 183 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 EGFP01133 1207 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 DNTTP04053 509 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 HSD3B1P14060 373 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 JUPP14923 745 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 CD1EP15812 388 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 ZNF8P17098 575 aaPredicted RBP8.15□□□□□ -1.1
RNF4-220ENST00000513578 GNAZP19086 355 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 HSD3B2P26439 372 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 TIE1P35590 1138 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 HNF4AP41235 474 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 GDF5P43026 501 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 GNPDA1P46926 289 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 ZFP36L2P47974 494 aaKnown RBP8.15□□□□□ -1.1
RNF4-220ENST00000513578 HTR6P50406 440 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 PSME3P61289 254 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 CDK3Q00526 305 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 DMPKQ09013 629 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 GRSF1Q12849 480 aaKnown RBP eCLIP8.15□□□□□ -1.1
RNF4-220ENST00000513578 ABRQ12979 859 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 SMAD4Q13485 552 aaKnown RBP8.15□□□□□ -1.1
RNF4-220ENST00000513578 RCAN2Q14206 197 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 ADGRE1Q14246 886 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 ABRAXAS2Q15018 415 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 RPS6KA2Q15349 733 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 ZNF423Q2M1K9 1284 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 KIF19Q2TAC6 998 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 TMEM259Q4ZIN3 620 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.15□□□□□ -1.1
RNF4-220ENST00000513578 C1orf146Q5VVC0 180 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 PAOXQ6QHF9 649 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 AGTRAPQ6RW13 159 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 MBOAT1Q6ZNC8 495 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 RIPOR1Q6ZS17 1223 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 LRRTM4Q86VH4 590 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 ZFAND4Q86XD8 727 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 SFRP1Q8N474 314 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 MINDY1Q8N5J2 469 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 IL17RCQ8NAC3 791 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 TP53I13Q8NBR0 393 aaPredicted RBP8.15□□□□□ -1.1
RNF4-220ENST00000513578 WDR34Q96EX3 536 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 CLPTM1LQ96KA5 538 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 FCRL1Q96LA6 429 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 CDK15Q96Q40 435 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 GPATCH1Q9BRR8 931 aaKnown RBP8.15□□□□□ -1.1
RNF4-220ENST00000513578 C1QTNF7Q9BXJ2 289 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 TTYH1Q9H313 450 aaPredicted RBP8.15□□□□□ -1.1
RNF4-220ENST00000513578 ACTR8Q9H981 624 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 EBF2Q9HAK2 575 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 ITM2CQ9NQX7 267 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 NOP53Q9NZM5 478 aaKnown RBP8.15□□□□□ -1.1
RNF4-220ENST00000513578 STOX2Q9P2F5 926 aaPredicted RBP8.15□□□□□ -1.1
RNF4-220ENST00000513578 STX18Q9P2W9 335 aaKnown RBP8.15□□□□□ -1.1
RNF4-220ENST00000513578 TSR3Q9UJK0 312 aaKnown RBP8.15□□□□□ -1.1
RNF4-220ENST00000513578 POMPQ9Y244 141 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 RNF11Q9Y3C5 154 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 PCDHGA7Q9Y5G6 932 aa8.15□□□□□ -1.1
RNF4-220ENST00000513578 A0A1W2PP55 124 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 PRR19A6NJB7 356 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 H0YIV9 168 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 TRIM38O00635 465 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 ANKRD28O15084 1053 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 KMOO15229 486 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 MBTPS2O43462 519 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 EEDO75530 441 aaKnown RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 SLC22A3O75751 556 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 PCDH8O95206 1070 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 HOXB2P14652 356 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 ME2P23368 584 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 JAK1P23458 1154 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 IMPA1P29218 277 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 PDHA2P29803 388 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 HSD17B2P37059 387 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 WASP42768 502 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 PREPP48147 710 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 HNRNPFP52597 415 aaKnown RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 DIO3P55073 304 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 TRAP1Q12931 704 aaKnown RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 CSTF3Q12996 717 aaKnown RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 PRKG2Q13237 762 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 KIAA0040Q15053 153 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 AP5B1Q2VPB7 878 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 MMEL1Q495T6 779 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 EOGTQ5NDL2 527 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 TCHHL1Q5QJ38 904 aaPredicted RBP8.14□□□□□ -1.11
RNF4-220ENST00000513578 METRNLQ641Q3 311 aa8.14□□□□□ -1.11
RNF4-220ENST00000513578 GRHL2Q6ISB3 625 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms