RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 DNAJC22Q8N4W6 341 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 OR5K2Q8NHB8 316 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 PRR7Q8TB68 274 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 UBE2Q2Q8WVN8 375 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 DLG3Q92796 817 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 SNRNP40Q96DI7 357 aaKnown RBP12.13□□□□□ -0.47
VEGFA-216ENST00000512683 OR2A14Q96R47 310 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 MFRPQ9BY79 579 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 FAM96AQ9H5X1 160 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 ZNF552Q9H707 407 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-216ENST00000512683 CASS4Q9NQ75 786 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 AGPAT4Q9NRZ5 378 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 TXLNGQ9NUQ3 528 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 P4HTMQ9NXG6 502 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 RIMKLBQ9ULI2 386 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 SLC5A6Q9Y289 635 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 ASF1AQ9Y294 204 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 PTRH2Q9Y3E5 179 aaKnown RBP12.13□□□□□ -0.47
VEGFA-216ENST00000512683 A0A0J9YY10 115 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 SLC5A10A0PJK1 596 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 MROH6A6NGR9 719 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 ENO4A6NNW6 628 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 ERI2A8K979 691 aaKnown RBP12.12□□□□□ -0.47
VEGFA-216ENST00000512683 CCL22O00626 93 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 ZSCAN9O15535 394 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-216ENST00000512683 RPN2P04844 631 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 CHRM5P08912 532 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-216ENST00000512683 OR56A5P0C7T3 313 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 CBSLP0DN79 551 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 UGT2B7P16662 529 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 OTX2P32243 289 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 CBSP35520 551 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 TMPRSS15P98073 1019 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 AIMP2Q13155 320 aaKnown RBP12.12□□□□□ -0.47
VEGFA-216ENST00000512683 ELOAQ14241 798 aaKnown RBP12.12□□□□□ -0.47
VEGFA-216ENST00000512683 DNAJC21Q5F1R6 531 aaKnown RBP12.12□□□□□ -0.47
VEGFA-216ENST00000512683 Q6ZS92 163 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 ARHGEF18Q6ZSZ5 1173 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 SLC34A3Q8N130 599 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 RNF10Q8N5U6 811 aaKnown RBP12.12□□□□□ -0.47
VEGFA-216ENST00000512683 CLDN19Q8N6F1 224 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 FKBP10Q96AY3 582 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 DNAJC1Q96KC8 554 aaKnown RBP12.12□□□□□ -0.47
VEGFA-216ENST00000512683 TMEM121Q9BTD3 319 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 NDC1Q9BTX1 674 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 HGH1Q9BTY7 390 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 WDR54Q9H977 334 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 FAM60AQ9NP50 221 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 SMARCAL1Q9NZC9 954 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 ICKQ9UPZ9 632 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 COPG1Q9Y678 874 aaKnown RBP12.12□□□□□ -0.47
VEGFA-216ENST00000512683 CREBBPQ92793 2442 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 SEC16AO15027 2179 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 ICE1Q9Y2F5 2266 aa12.12□□□□□ -0.47
VEGFA-216ENST00000512683 AGPSO00116 658 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 GAS8O95995 478 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 LDLRP01130 860 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 PVRP15151 417 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 TPH1P17752 444 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 ITGAXP20702 1163 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 MMP11P24347 488 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 STIP1P31948 543 aaKnown RBP12.11□□□□□ -0.47
VEGFA-216ENST00000512683 CDKN1CP49918 316 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-216ENST00000512683 MRPL49Q13405 166 aaKnown RBP12.11□□□□□ -0.47
VEGFA-216ENST00000512683 DBN1Q16643 649 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 CYP2A13Q16696 494 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 ZC3H12BQ5HYM0 836 aaKnown RBP12.11□□□□□ -0.47
VEGFA-216ENST00000512683 TCTE1Q5JU00 501 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 IGFL2Q6UWQ7 119 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 NLRP9Q7RTR0 991 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 PIANPQ8IYJ0 282 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 TXLNBQ8N3L3 684 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 ATG4AQ8WYN0 398 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 ELMO1Q92556 727 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 PEX13Q92968 403 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 C5orf34Q96MH7 638 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 TSSK1BQ9BXA7 367 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 SPRTNQ9H040 489 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-216ENST00000512683 ILKAPQ9H0C8 392 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-216ENST00000512683 XKR8Q9H6D3 395 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 MRM3Q9HC36 420 aaKnown RBP12.11□□□□□ -0.47
VEGFA-216ENST00000512683 INTS7Q9NVH2 962 aaKnown RBP12.11□□□□□ -0.47
VEGFA-216ENST00000512683 MAP10Q9P2G4 905 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 NXT1Q9UKK6 140 aaKnown RBP12.11□□□□□ -0.47
VEGFA-216ENST00000512683 MRFAP1Q9Y605 127 aa12.11□□□□□ -0.47
VEGFA-216ENST00000512683 NBPF19A0A087WUL8 3843 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 ANKUB1A6NFN9 424 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 TARM1B6A8C7 271 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 PTMAP06454 111 aaKnown RBP12.1□□□□□ -0.47
VEGFA-216ENST00000512683 PRSS56P0CW18 603 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 RAB28P51157 221 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 OASLQ15646 514 aaKnown RBP12.1□□□□□ -0.47
VEGFA-216ENST00000512683 ZIC1Q15915 447 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 KYNUQ16719 465 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 FAM214AQ32MH5 1076 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 OVCH1Q7RTY7 1134 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 PPP1R32Q7Z5V6 425 aa12.1□□□□□ -0.47
VEGFA-216ENST00000512683 TAB3Q8N5C8 712 aaPredicted RBP12.1□□□□□ -0.47
VEGFA-216ENST00000512683 CISD2Q8N5K1 135 aaKnown RBP12.1□□□□□ -0.47
VEGFA-216ENST00000512683 OR5AR1Q8NGP9 310 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms