RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 DNAJC28Q9NX36 388 aa16.29■□□□□ 0.2
SCAMP1-203ENST00000510030 KLHL14Q9P2G3 628 aa16.29■□□□□ 0.2
SCAMP1-203ENST00000510030 PCTPQ9UKL6 214 aa16.29■□□□□ 0.2
SCAMP1-203ENST00000510030 PCYT1BQ9Y5K3 369 aaPredicted RBP16.29■□□□□ 0.2
SCAMP1-203ENST00000510030 CACNA1HO95180 2353 aa16.29■□□□□ 0.2
SCAMP1-203ENST00000510030 YKT6O15498 198 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 DFNA5O60443 496 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 MTHFD1P11586 935 aaKnown RBP16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 DRD4P21917 467 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 RPL10P27635 214 aaKnown RBP16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 NBL1P41271 181 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 ARRB1P49407 418 aaPredicted RBP16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 RPL14P50914 215 aaKnown RBP16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 CLCQ05315 142 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 TERF2Q15554 542 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 ARL13AQ5H913 290 aaPredicted RBP16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 TPRG1LQ5T0D9 272 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 ZC3H14Q6PJT7 736 aaKnown RBP16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 XKR5Q6UX68 686 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 SYT12Q8IV01 421 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 KLHDC8AQ8IYD2 350 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 ZBTB44Q8NCP5 570 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 ZNF382Q96SR6 550 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 CCT7Q99832 543 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 FAM107BQ9H098 131 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 PCBD2Q9H0N5 130 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 GSTO2Q9H4Y5 243 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 SLCO1B3Q9NPD5 702 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 IMP3Q9NV31 184 aaKnown RBP16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 PSMD13Q9UNM6 376 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 R4GN57 208 aa16.28■□□□□ 0.2
SCAMP1-203ENST00000510030 PROB1E7EW31 1015 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 E2F3O00716 465 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 CCNT2O60583 730 aaKnown RBP16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 CHEK2O96017 543 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 MAOBP27338 520 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 SLC6A12P48065 614 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 CDC16Q13042 620 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 GTF2H2Q13888 395 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 UNC50Q53HI1 259 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 PEAR1Q5VY43 1037 aaPredicted RBP16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 CAPN13Q6MZZ7 669 aaPredicted RBP16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 GTF2H2CQ6P1K8 395 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 SLC30A9Q6PML9 568 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 AGTRAPQ6RW13 159 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 ARMCX6Q7L4S7 300 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 SPATA21Q7Z572 469 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 TAF8Q7Z7C8 310 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 SYTL1Q8IYJ3 562 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 STON2Q8WXE9 905 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 ATP6V1E2Q96A05 226 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 CXorf40BQ96DE9 158 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 MIPEPQ99797 713 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 HGH1Q9BTY7 390 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 POT1Q9NUX5 634 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 DNAJC11Q9NVH1 559 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 GPRC5BQ9NZH0 403 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 STOX2Q9P2F5 926 aaPredicted RBP16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 DOLKQ9UPQ8 538 aa16.27■□□□□ 0.2
SCAMP1-203ENST00000510030 TNRC6BQ9UPQ9 1833 aaKnown RBP16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 TRPC5OSA6NMA1 111 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 UGDHO60701 494 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 CRCPO75575 148 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 SIX3O95343 332 aaPredicted RBP16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 SLC16A8O95907 504 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 WNT1P04628 370 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 ENO1P06733 434 aaKnown RBP16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 ITPKAP23677 461 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 BDKRB1P46663 353 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 HSPA7P48741 367 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 RPE65Q16518 533 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 RBBP7Q16576 425 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 PRRT3Q5FWE3 981 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 IL27RAQ6UWB1 636 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 CUZD1Q86UP6 607 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 TRIM48Q8IWZ4 208 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 LOXL4Q96JB6 756 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 FERD3LQ96RJ6 166 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 INSM2Q96T92 566 aaPredicted RBP16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 SORT1Q99523 831 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 PKP4Q99569 1192 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 TMEM79Q9BSE2 394 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 HAUS8Q9BT25 410 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 KIR3DX1Q9H7L2 352 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 CCDC177Q9NQR7 707 aaPredicted RBP16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 MRGBPQ9NV56 204 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 KCNK4Q9NYG8 393 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 TBC1D29Q9UFV1 150 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 PILRBQ9UKJ0 227 aa16.26■□□□□ 0.19
SCAMP1-203ENST00000510030 SPAG17Q6Q759 2223 aa16.25■□□□□ 0.19
SCAMP1-203ENST00000510030 SNX3O60493 162 aa16.25■□□□□ 0.19
SCAMP1-203ENST00000510030 WDR47O94967 919 aa16.25■□□□□ 0.19
SCAMP1-203ENST00000510030 ESRRBO95718 433 aa16.25■□□□□ 0.19
SCAMP1-203ENST00000510030 FGF4P08620 206 aa16.25■□□□□ 0.19
SCAMP1-203ENST00000510030 SP9P0CG40 484 aa16.25■□□□□ 0.19
SCAMP1-203ENST00000510030 ERGP11308 486 aa16.25■□□□□ 0.19
SCAMP1-203ENST00000510030 XRCC1P18887 633 aaPredicted RBP16.25■□□□□ 0.19
SCAMP1-203ENST00000510030 IMPA1P29218 277 aa16.25■□□□□ 0.19
SCAMP1-203ENST00000510030 SHMT2P34897 504 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms