RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 OR1I1O60431 355 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 CRTAMO95727 393 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 PRF1P14222 555 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 MCM3P25205 808 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 PTPN7P35236 360 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 HADHAP40939 763 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 RRADP55042 308 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 RPA4Q13156 261 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 SEMA3AQ14563 771 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 POU6F1Q14863 301 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 GPR33Q49SQ1 333 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 C1QL3Q5VWW1 255 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 HPS6Q86YV9 775 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 TICAM1Q8IUC6 712 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 TAB3Q8N5C8 712 aaPredicted RBP12.87□□□□□ -0.35
DDX41-210ENST00000509576 ZNF778Q96MU6 729 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 SPSB2Q99619 263 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 CHRNA10Q9GZZ6 450 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 SYNPO2LQ9H987 977 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 SLC2A6Q9UGQ3 507 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 AAR2Q9Y312 384 aaKnown RBP12.87□□□□□ -0.35
DDX41-210ENST00000509576 PCDHA13Q9Y5I0 950 aa12.87□□□□□ -0.35
DDX41-210ENST00000509576 MACROD2A1Z1Q3 448 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 CCDC162PA2VCL2 907 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 MROH6A6NGR9 719 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 IFRD1O00458 451 aaPredicted RBP12.86□□□□□ -0.35
DDX41-210ENST00000509576 RALBP11234 206 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 MAGP20916 626 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 PKLRP30613 574 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 FOLR3P41439 243 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 TNNT3P45378 269 aaPredicted RBP12.86□□□□□ -0.35
DDX41-210ENST00000509576 YBX1P67809 324 aaKnown RBP12.86□□□□□ -0.35
DDX41-210ENST00000509576 DCDP81605 110 aaKnown RBP12.86□□□□□ -0.35
DDX41-210ENST00000509576 CCDC38Q502W7 563 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 FCRL6Q6DN72 434 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 IGFL2Q6UWQ7 119 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 SHISA6Q6ZSJ9 500 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 TAS2R42Q7RTR8 314 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 CDKL3Q8IVW4 592 aaPredicted RBP12.86□□□□□ -0.35
DDX41-210ENST00000509576 SPNS2Q8IVW8 549 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 C2orf73Q8N5S3 287 aaPredicted RBP12.86□□□□□ -0.35
DDX41-210ENST00000509576 RNF214Q8ND24 703 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 OR13J1Q8NGT2 312 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 UBE2Q2Q8WVN8 375 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 IL17FQ96PD4 163 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 LACRTQ9GZZ8 138 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 SMARCAL1Q9NZC9 954 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 IFT80Q9P2H3 777 aaPredicted RBP12.86□□□□□ -0.35
DDX41-210ENST00000509576 NOVA2Q9UNW9 492 aaKnown RBP12.86□□□□□ -0.35
DDX41-210ENST00000509576 SLC5A6Q9Y289 635 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 ASF1AQ9Y294 204 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 HS3ST3B1Q9Y662 390 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 CELSR1Q9NYQ6 3014 aa12.86□□□□□ -0.35
DDX41-210ENST00000509576 IQCF5A8MTL0 148 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 AKR1B15C9JRZ8 316 aaPredicted RBP12.85□□□□□ -0.35
DDX41-210ENST00000509576 CFAP99D6REC4 459 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 PRICKLE3O43900 615 aaPredicted RBP12.85□□□□□ -0.35
DDX41-210ENST00000509576 ONECUT2O95948 504 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 AGXTP21549 392 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 CTNNA2P26232 953 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 SHMT2P34897 504 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 GRIA1P42261 906 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 CSE1LP55060 971 aaKnown RBP12.85□□□□□ -0.35
DDX41-210ENST00000509576 COPS2P61201 443 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 CACNG1Q06432 222 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 DARS2Q6PI48 645 aaKnown RBP12.85□□□□□ -0.35
DDX41-210ENST00000509576 KIRREL2Q6UWL6 708 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 PACS1Q6VY07 963 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 ZNF534Q76KX8 674 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 KCNMB4Q86W47 210 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 TBC1D21Q8IYX1 336 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 GPR135Q8IZ08 494 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 LRRC57Q8N9N7 239 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 FAM71DQ8N9W8 422 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 OR5K2Q8NHB8 316 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 PROKR1Q8TCW9 393 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 HEXDCQ8WVB3 486 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 ELMO1Q92556 727 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 SLC29A3Q9BZD2 475 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 SLC7A5P2Q9GIP4 190 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 EURLQ9NYK6 297 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 IMPACTQ9P2X3 320 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 CTSFQ9UBX1 484 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 FBXL4Q9UKA2 621 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 EFR3BQ9Y2G0 817 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 PADI2Q9Y2J8 665 aa12.85□□□□□ -0.35
DDX41-210ENST00000509576 TDRKHQ9Y2W6 561 aaKnown RBP12.85□□□□□ -0.35
DDX41-210ENST00000509576 ADGRG4Q8IZF6 3080 aa12.84□□□□□ -0.35
DDX41-210ENST00000509576 GRID2IPA4D2P6 1211 aa12.84□□□□□ -0.35
DDX41-210ENST00000509576 SOWAHDA6NJG2 315 aa12.84□□□□□ -0.35
DDX41-210ENST00000509576 AGPSO00116 658 aa12.84□□□□□ -0.35
DDX41-210ENST00000509576 LIN7AO14910 233 aaPredicted RBP12.84□□□□□ -0.35
DDX41-210ENST00000509576 CBFA2T2O43439 604 aa12.84□□□□□ -0.35
DDX41-210ENST00000509576 CTSVO60911 334 aa12.84□□□□□ -0.35
DDX41-210ENST00000509576 HBQ1P09105 142 aa12.84□□□□□ -0.35
DDX41-210ENST00000509576 MSNP26038 577 aaKnown RBP12.84□□□□□ -0.35
DDX41-210ENST00000509576 CCR7P32248 378 aa12.84□□□□□ -0.35
DDX41-210ENST00000509576 GRIA3P42263 894 aa12.84□□□□□ -0.35
DDX41-210ENST00000509576 EFNA3P52797 238 aa12.84□□□□□ -0.35
DDX41-210ENST00000509576 SNRPNP63162 240 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms