RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 TRIM36Q9NQ86 728 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 C12orf4Q9NQ89 552 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 ARL8BQ9NVJ2 186 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 DNAJC17Q9NVM6 304 aaKnown RBP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 GGA3Q9NZ52 723 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 ATP6V1HQ9UI12 483 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 VPS28Q9UK41 221 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 RIMKLBQ9ULI2 386 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 ARHGAP26Q9UNA1 814 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 PLA2G4CQ9UP65 541 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 NIP7Q9Y221 180 aaKnown RBP eCLIP4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 HS3ST3B1Q9Y662 390 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 LAMB1P07942 1786 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 MYH4Q9Y623 1939 aa4.52□□□□□ -1.69
PDLIM5-211ENST00000508531 ZNF831Q5JPB2 1677 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 MROH5Q6ZUA9 1318 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 CCDC194A0A1B0GVG4 234 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 ARHGEF37A1IGU5 675 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 C16orf96A6NNT2 1141 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 B4DGG1 531 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 H3BNH8 94 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 H3BSA7 217 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 PSMD12O00232 456 aaPredicted RBP4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 POLR1CO15160 346 aaPredicted RBP4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 CLOCKO15516 846 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 GPAA1O43292 621 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 SPOPO43791 374 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 TYROBPO43914 113 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 TOMM40O96008 361 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 GH1P01241 217 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 TRAPPC2P0DI81 140 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 TRAPPC2BP0DI82 140 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 ACTN1P12814 892 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 GAP43P17677 238 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 ITGAXP20702 1163 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 RPA1P27694 616 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 PEX2P28328 305 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 EEF1DP29692 281 aaKnown RBP4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 CIITAP33076 1130 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 TRIM23P36406 574 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 ETV1P50549 477 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 P2RX3P56373 397 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 DEFA1P59665 94 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 DEFA3P59666 94 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 KRTAP10-7P60409 375 aaPredicted RBP4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 PPATQ06203 517 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 NAB1Q13506 487 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 ARHGEF7Q14155 803 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 GCKRQ14397 625 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 GALNT3Q14435 633 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 EFTUD2Q15029 972 aaKnown RBP eCLIP4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 NPY5RQ15761 445 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 CEP55Q53EZ4 464 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 SFT2D3Q587I9 215 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 DCAF6Q58WW2 860 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 EARS2Q5JPH6 523 aaKnown RBP4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 C3orf38Q5JPI3 329 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 RHBDF2Q6PJF5 856 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 C9orf47Q6ZRZ4 202 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 COLCA1Q6ZS62 124 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 C15orf52Q6ZUT6 534 aaKnown RBP4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 USP49Q70CQ1 688 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 ARCQ7LC44 396 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 DGLUCYQ7Z3D6 616 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 PALB2Q86YC2 1186 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 SLC13A5Q86YT5 568 aaPredicted RBP4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 CLVS1Q8IUQ0 354 aaPredicted RBP4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 UNC45BQ8IWX7 931 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 ELMOD2Q8IZ81 293 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 FBXW8Q8N3Y1 598 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 ZCCHC9Q8N567 271 aaKnown RBP4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 DCLK2Q8N568 766 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 SLC4A11Q8NBS3 891 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 LEMD2Q8NC56 503 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 EXD1Q8NHP7 514 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 HCAR2Q8TDS4 363 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 TRIB2Q92519 343 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 CELF1Q92879 486 aaKnown RBP4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 C12orf43Q96C57 262 aaKnown RBP4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 VMP1Q96GC9 406 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 KAZALD1Q96I82 304 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 CNBD2Q96M20 576 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 RANBP9Q96S59 729 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 TRMOQ9BU70 441 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 ANKRD60Q9BZ19 345 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 FAM234AQ9H0X4 552 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 NAPBQ9H115 298 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 RAD21L1Q9H4I0 556 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 GPN2Q9H9Y4 310 aaPredicted RBP4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 ZC4H2Q9NQZ6 224 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 NINJ2Q9NZG7 142 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 EMC3Q9P0I2 261 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 MBD2Q9UBB5 411 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 GRID1Q9ULK0 1009 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 NENFQ9UMX5 172 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 CAB39Q9Y376 341 aaPredicted RBP4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 UGT2A1Q9Y4X1 527 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 CPQQ9Y646 472 aa4.51□□□□□ -1.69
PDLIM5-211ENST00000508531 ROBO3Q96MS0 1386 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms