RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 IDI1Q13907 227 aa4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 PWWP2BQ6NUJ5 590 aa4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 INTS8Q75QN2 995 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 TBC1D1Q86TI0 1168 aaPredicted RBP4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 ANKRD9Q96BM1 317 aaPredicted RBP4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 C16orf70Q9BSU1 422 aa4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 CDK19Q9BWU1 502 aa4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 HRH4Q9H3N8 390 aa4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 KLHL8Q9P2G9 620 aaPredicted RBP4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 RHCGQ9UBD6 479 aa4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 ZNF69Q9UC07 566 aa4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 ADAMTS13Q76LX8 1427 aa4.63□□□□□ -1.67
TOPBP1-206ENST00000508524 MYOM2P54296 1465 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 LNP1A1A4G5 178 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 E9PI62 339 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 CREG1O75629 220 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 RAF1P04049 648 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 CEBPBP17676 345 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 CXCL9Q07325 125 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 AIMP2Q13155 320 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 CYP4A22Q5TCH4 519 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 GTSCR1Q86UQ5 136 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 OR2T11Q8NH01 316 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 OR2T6Q8NHC8 308 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 MRGPRDQ8TDS7 321 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 MTERF3Q96E29 417 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 TRAF4Q9BUZ4 470 aaPredicted RBP4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 VN1R1Q9GZP7 353 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 ARRDC1-AS1Q9H2J1 176 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 PLCXD1Q9NUJ7 323 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 FLRT3Q9NZU0 649 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 CASKIN1Q8WXD9 1431 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 NCOA3Q9Y6Q9 1424 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 CCDC18Q5T9S5 1454 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 CCDC141Q6ZP82 1450 aa4.62□□□□□ -1.67
TOPBP1-206ENST00000508524 SPHKAPQ2M3C7 1700 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 A0A0J9YWU9 116 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 PIGNO95427 931 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 DPEP1P16444 411 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 TYMPP19971 482 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 EFNA1P20827 205 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 SNRPD1P62314 119 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 SP3Q02447 781 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 Q6ZSR9 355 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 STXBP4Q6ZWJ1 553 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 AACSQ86V21 672 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 RNF128Q8TEB7 428 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 MOCOSQ96EN8 888 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 OR6C1Q96RD1 312 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 EGFL8Q99944 293 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 RTN4RQ9BZR6 473 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 A4GALTQ9NPC4 353 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 INTS9Q9NV88 658 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 PAK5Q9P286 719 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 OSGIN1Q9UJX0 560 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 EXOGQ9Y2C4 368 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 CCNB3Q8WWL7 1395 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 PTCH1Q13635 1447 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 ARHGAP31Q2M1Z3 1444 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 ADGRB3O60242 1522 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 TRPM2O94759 1503 aa4.61□□□□□ -1.67
TOPBP1-206ENST00000508524 PTGES3LE9PB15 166 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 H7C423 109 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 PAPSS1O43252 624 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 SSX4O60224 188 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 BAIAP3O94812 1187 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 NKX2-1P43699 371 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 MFAP4P55083 255 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 ARF3P61204 181 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 ARF1P84077 181 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 FAAP20Q6NZ36 180 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 RSRC2Q7L4I2 434 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 MAATS1Q7Z4T9 603 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 TMEM178AQ8NBL3 297 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 HPSE2Q8WWQ2 592 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 CCDC34Q96HJ3 373 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 NSL1Q96IY1 281 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 MCRIP2Q9BUT9 160 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 TRIM15Q9C019 465 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 LAT2Q9GZY6 243 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 CHMP1AQ9HD42 196 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 OSER1Q9NX31 292 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 LARSQ9P2J5 1176 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 SEC63Q9UGP8 760 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 ASIC3Q9UHC3 531 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 PLEKHG1Q9ULL1 1385 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 DCCP43146 1447 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 LAMC1P11047 1609 aa4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 COL22A1Q8NFW1 1626 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 TP53BP1Q12888 1972 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-206ENST00000508524 LOC101059948A0A1B0GTJ6 334 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 A0A1W2PN81 502 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 LRRC72A6NJI9 287 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 HEPACAM2A8MVW5 462 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 CDC123O75794 336 aaPredicted RBP4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 SLIT2O94813 1529 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 CA4P22748 312 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 CHRNA7P36544 502 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 PSMB10P40306 273 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 B3GALT5-AS1P59052 145 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms