RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 GPR135Q8IZ08 494 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 ZBTB2Q8N680 514 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 CCDC89Q8N998 374 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 OR6P1Q8NGX9 317 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 TCTN2Q96GX1 697 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 MENTQ9BUN1 341 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 AP1M1Q9BXS5 423 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 TSGA10Q9BZW7 698 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 SLC7A5P2Q9GIP4 190 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 PAK5Q9P286 719 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 ANKRD12Q6UB98 2062 aa12.55□□□□□ -0.4
HMGCS1-205ENST00000508319 IQCF5A8MTL0 148 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 C9J4A7 227 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 ZSCAN9O15535 394 aaPredicted RBP12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 GPC4O75487 556 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 KLF7O75840 302 aaPredicted RBP12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 SORBS2O94875 1100 aaKnown RBP12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 HBQ1P09105 142 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 ZSCAN5DPP0CG00 497 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 CBSLP0DN79 551 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 CBSP35520 551 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 RAB28P51157 221 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 PRAMEP78395 509 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 HSPA14Q0VDF9 509 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 ATP1A4Q13733 1029 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 GRB7Q14451 532 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 KIR2DS3Q14952 304 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 FASTKD1Q53R41 847 aaKnown RBP12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 DNAJC21Q5F1R6 531 aaKnown RBP12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 AARS2Q5JTZ9 985 aaKnown RBP12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 MEI1Q5TIA1 1274 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 LINC01555Q8NAE3 123 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 PPHLN1Q8NEY8 458 aaKnown RBP12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 N4BP2L2Q92802 583 aaPredicted RBP12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 COL26A1Q96A83 441 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 GBP5Q96PP8 586 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 TTC1Q99614 292 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 DHRS4Q9BTZ2 278 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 SPRTNQ9H040 489 aaPredicted RBP12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 EIF2B3Q9NR50 452 aaKnown RBP12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 CHRAC1Q9NRG0 131 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 TREX1Q9NSU2 369 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 MARCH4Q9P2E8 410 aaPredicted RBP12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 ANKMY1Q9P2S6 941 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 PADI2Q9Y2J8 665 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 AP1M2Q9Y6Q5 423 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 NUP210LQ5VU65 1888 aa12.54□□□□□ -0.4
HMGCS1-205ENST00000508319 F8W8V4 182 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 MAGP20916 626 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 AGXTP21549 392 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 RPL22P35268 128 aaKnown RBP12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 GCGRP47871 477 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 CRADDP78560 199 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 CCNG2Q16589 344 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 KYNUQ16719 465 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 SLC5A12Q1EHB4 618 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 NADK2Q4G0N4 442 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 C1orf189Q5VU69 101 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 DRICH1Q6PGQ1 229 aaPredicted RBP12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 MRGPREQ86SM8 312 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 LDB1Q86U70 411 aaPredicted RBP12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 DCUN1D3Q8IWE4 304 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 FAM20CQ8IXL6 584 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 DNAJC22Q8N4W6 341 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 TMEM102Q8N9M5 508 aaPredicted RBP12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 LMNTD1Q8N9Z9 388 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 FDCSPQ8NFU4 85 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 PROKR1Q8TCW9 393 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 UBE2Q2Q8WVN8 375 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 ASZ1Q8WWH4 475 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 NUDT9Q9BW91 350 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 CARD6Q9BX69 1037 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 CATSPERZQ9NTU4 200 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 HIVEP3Q5T1R4 2406 aa12.53□□□□□ -0.4
HMGCS1-205ENST00000508319 ISM1B1AKI9 464 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 PRMT5O14744 637 aaPredicted RBP12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 KDM1AO60341 852 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 CNOT3O75175 753 aaKnown RBP12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 SLCO2B1O94956 709 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 CD9P21926 228 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 ARNTP27540 789 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 AOAHP28039 575 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 PPARGP37231 505 aaPredicted RBP12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 UQCRFS1P47985 274 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 RRADP55042 308 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 SESN2P58004 480 aaPredicted RBP12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 RPS6KA1Q15418 735 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 PCID2Q5JVF3 399 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 TLDC1Q6P9B6 456 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 UNC5DQ6UXZ4 953 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 MED25Q71SY5 747 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 ATCAYQ86WG3 371 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 RAB43Q86YS6 212 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 KRT222Q8N1A0 295 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 FAM26EQ8N5C1 309 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 ZNF655Q8N720 491 aaPredicted RBP12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 CPT1CQ8TCG5 803 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 IL17FQ96PD4 163 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 TSSK1BQ9BXA7 367 aa12.52□□□□□ -0.41
HMGCS1-205ENST00000508319 P2RY12Q9H244 342 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms