RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 RBM15BQ8NDT2 890 aaKnown RBP3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 ACVR1CQ8NER5 493 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 OR5R1Q8NH85 324 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 MOSPD2Q8NHP6 518 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 CFAP61Q8NHU2 1237 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 GRK7Q8WTQ7 553 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 TM9SF4Q92544 642 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 RHBDF1Q96CC6 855 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 DDOQ99489 341 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 UBXN6Q9BZV1 441 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 PIGMQ9H3S5 423 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 TFB2MQ9H5Q4 396 aaKnown RBP3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 MBNL1Q9NR56 388 aaKnown RBP3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 ADPRHL2Q9NX46 363 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 STK39Q9UEW8 545 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 ARMCX3Q9UH62 379 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 TSPYL4Q9UJ04 414 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 MOSPD1Q9UJG1 213 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 KNSTRNQ9Y448 316 aa3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.92□□□□□ -1.78
TRAPPC13-209ENST00000508304 A0A0G2JLW4 131 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 KANSL1LA0AUZ9 987 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 GTPBP10A4D1E9 387 aaKnown RBP3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 EIF4E1BA6NMX2 242 aaKnown RBP3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 ANKRD66B4E2M5 251 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 PI4K2BG5E9Z4 385 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 ZNF263O14978 683 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 SLCO2B1O94956 709 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 GOSR1O95249 250 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 GH2P01242 217 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 HLA-DPA1P20036 260 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 CDH13P55290 713 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 CLDN20P56880 219 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 CXCL9Q07325 125 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 AP1B1Q10567 949 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 NHSL2Q5HYW2 709 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 MPP7Q5T2T1 576 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 TMEM211Q6ICI0 200 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 PAPD4Q6PIY7 484 aaKnown RBP3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 RBPMS2Q6ZRY4 209 aaKnown RBP3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 INTS8Q75QN2 995 aaKnown RBP3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 PIWIL3Q7Z3Z3 882 aaKnown RBP3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 LDB1Q86U70 411 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 TUSC5Q8IXB3 177 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 AFAP1Q8N556 730 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 STPG4Q8N801 248 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 XXYLT1Q8NBI6 393 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 UTP15Q8TED0 518 aaKnown RBP3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 NXNL1Q96CM4 212 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 ABHD8Q96I13 439 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 LRR1Q96L50 414 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 ZNF830Q96NB3 372 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 SMC6Q96SB8 1091 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 ACAT2Q9BWD1 397 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 KCNK15Q9H427 330 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 ST6GALNAC4Q9H4F1 302 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 PAK5Q9P286 719 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 LARSQ9P2J5 1176 aaKnown RBP3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 DNAJB9Q9UBS3 223 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 DNAJB4Q9UDY4 337 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 IL17BQ9UHF5 180 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 ACAD8Q9UKU7 415 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 CLIC4Q9Y696 253 aa3.91□□□□□ -1.78
TRAPPC13-209ENST00000508304 OR5K3A6NET4 321 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 OR6C76A6NM76 312 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 FAM90A26D6RGX4 464 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 NR5A2O00482 541 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 SMAD9O15198 467 aaKnown RBP3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 PRAMEF11O60813 436 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 CSF2RAP15509 400 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 ACHEP22303 614 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 UGT1A1P22309 533 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 EEF1B2P24534 225 aaKnown RBP3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 ACADLP28330 430 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 DCTP40126 519 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 APOBEC1P41238 236 aaKnown RBP3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 ARCN1P48444 511 aaKnown RBP3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 SIRPAP78324 504 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 RPL24P83731 157 aaKnown RBP3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 RCN2Q14257 317 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 FAM98BQ52LJ0 330 aaKnown RBP3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 SOWAHCQ53LP3 525 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 SLC10A5Q5PT55 438 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 MOXD1Q6UVY6 613 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 ZBTB49Q6ZSB9 765 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 C11orf57Q6ZUT1 292 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 DET1Q7L5Y6 550 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 CENPVQ7Z7K6 275 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 GLRX5Q86SX6 157 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 HOOK3Q86VS8 718 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 TMEM173Q86WV6 379 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 DZIP1Q86YF9 867 aaKnown RBP3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 APLFQ8IW19 511 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 TRIML1Q8N9V2 468 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 OR1J2Q8NGS2 313 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 HM13Q8TCT9 377 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 EXOC4Q96A65 974 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 PHF21AQ96BD5 680 aa3.9□□□□□ -1.79
TRAPPC13-209ENST00000508304 SPACA9Q96E40 222 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms