RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 TMEM139Q8IV31 216 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 FAM20CQ8IXL6 584 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 ZNF655Q8N720 491 aaPredicted RBP11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 RBMXL3Q8N7X1 1067 aaKnown RBP11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 Q8NA96 180 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 PROKR1Q8TCW9 393 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 LKAAEAR1Q8TD35 194 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 HDAC10Q969S8 669 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 SGSM3Q96HU1 749 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 HES6Q96HZ4 224 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 GBP5Q96PP8 586 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 C17orf62Q9BQA9 187 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 CHRNA10Q9GZZ6 450 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 ETNK1Q9HBU6 452 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 LRRC4CQ9HCJ2 640 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 SLAMF7Q9NQ25 335 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 IRAK4Q9NWZ3 460 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 MAP10Q9P2G4 905 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 DHCR7Q9UBM7 475 aaKnown RBP11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 NDOR1Q9UHB4 597 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 SRPK3Q9UPE1 567 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 CDYLQ9Y232 598 aa11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 PTRH2Q9Y3E5 179 aaKnown RBP11.13□□□□□ -0.63
HMGCS1-204ENST00000507293 ESPL1Q14674 2120 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 E7EVH7 732 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 F8W8V4 182 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 LIASO43766 372 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 KDM1AO60341 852 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 SUN1O94901 812 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 PKLRP30613 574 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 CCR7P32248 378 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 FDFT1P37268 417 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 GRIA1P42261 906 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 FOXL2P58012 376 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 DCDP81605 110 aaKnown RBP11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 PLOD1Q02809 727 aaPredicted RBP11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 SEMA3AQ14563 771 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 SLC9A5Q14940 896 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 KIR2DS3Q14952 304 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 OASLQ15646 514 aaKnown RBP11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 SLC5A12Q1EHB4 618 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 DNAJC21Q5F1R6 531 aaKnown RBP11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 VWA5B1Q5TIE3 1220 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 TLDC1Q6P9B6 456 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 ZNF534Q76KX8 674 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 PRUNE1Q86TP1 453 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 VRK3Q8IV63 474 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 SLC22A15Q8IZD6 547 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 TXLNBQ8N3L3 684 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 DNAJC22Q8N4W6 341 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 LMNTD1Q8N9Z9 388 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 PNPLA2Q96AD5 504 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 ZNF778Q96MU6 729 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 RANBP9Q96S59 729 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 TTC1Q99614 292 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 SMAD5Q99717 465 aaKnown RBP11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 AP1M1Q9BXS5 423 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 TXLNGQ9NUQ3 528 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 IFT80Q9P2H3 777 aaPredicted RBP11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 PLCL2Q9UPR0 1127 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 KLHL20Q9Y2M5 609 aa11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 USP9XQ93008 2570 aaPredicted RBP11.12□□□□□ -0.63
HMGCS1-204ENST00000507293 IQCF5A8MTL0 148 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 TCP11X1B4DZS4 312 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 PEX12O00623 359 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 CNOT3O75175 753 aaKnown RBP11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 IFNB1P01574 187 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 ETS1P14921 441 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 MAGP20916 626 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 ADRA1DP25100 572 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 STIP1P31948 543 aaKnown RBP11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 RAB28P51157 221 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 PRAMEP78395 509 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 ACVR1Q04771 509 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 HSPA14Q0VDF9 509 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 SSPNQ14714 243 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 FASTKD1Q53R41 847 aaKnown RBP11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 SEL1L2Q5TEA6 688 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 HIST2H2BCQ6DN03 193 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 TAX1BP1Q86VP1 789 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 TMEM151BQ8IW70 566 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 KRT222Q8N1A0 295 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 C2orf73Q8N5S3 287 aaPredicted RBP11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 LINC01555Q8NAE3 123 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 OR2Y1Q8NGV0 311 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 OR6P1Q8NGX9 317 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 OR4L1Q8NH43 312 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 CFAP61Q8NHU2 1237 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 C1orf54Q8WWF1 131 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 FER1L6-AS2Q96M78 137 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 IP6K3Q96PC2 410 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 IL17FQ96PD4 163 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 NDC1Q9BTX1 674 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 TSSK1BQ9BXA7 367 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 CASS4Q9NQ75 786 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 RAB6BQ9NRW1 208 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 P4HTMQ9NXG6 502 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 EURLQ9NYK6 297 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 C5AR2Q9P296 337 aa11.11□□□□□ -0.63
HMGCS1-204ENST00000507293 CIDEBQ9UHD4 219 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms