RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CREG1O75629 220 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 MED26O95402 600 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 MYCP01106 439 aaPredicted RBP7.46□□□□□ -1.21
NEDD9-208ENST00000504387 GGT1P19440 569 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 HSPA7P48741 367 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 SEMG2Q02383 582 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 CCL15Q16663 113 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 ABI3BPQ7Z7G0 1075 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 HORMAD1Q86X24 394 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 RNF175Q8N4F7 328 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 HMCESQ96FZ2 354 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 FCRL5Q96RD9 977 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 SMAD5Q99717 465 aaKnown RBP7.46□□□□□ -1.21
NEDD9-208ENST00000504387 EGFL8Q99944 293 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 SEMA3CQ99985 751 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 ARPC5LQ9BPX5 153 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 C16orf70Q9BSU1 422 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 INPP5KQ9BT40 448 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 CNPPD1Q9BV87 410 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 ZNF717Q9BY31 904 aaPredicted RBP7.46□□□□□ -1.21
NEDD9-208ENST00000504387 RAD18Q9NS91 495 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 KRT84Q9NSB2 600 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 TAS2R9Q9NYW1 312 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 SLC6A14Q9UN76 642 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 SPEF1Q9Y4P9 236 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 PCDHGB6Q9Y5F9 930 aa7.46□□□□□ -1.21
NEDD9-208ENST00000504387 LRRC37AA6NMS7 1700 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 M0QZ92 97 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 PCDHGA12O60330 932 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 OPN1SWP03999 348 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 HOXD8P13378 290 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-208ENST00000504387 ATN1P54259 1190 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-208ENST00000504387 GALK2Q01415 458 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 CBLBQ13191 982 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 CPSF6Q16630 551 aaKnown RBP eCLIP7.46□□□□□ -1.22
NEDD9-208ENST00000504387 LRRC26Q2I0M4 334 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 SPDYE7PQ495Y7 208 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 ZRANB3Q5FWF4 1079 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 MARC1Q5VT66 337 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 KLHL17Q6TDP4 642 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF598Q86UK7 904 aaKnown RBP7.46□□□□□ -1.22
NEDD9-208ENST00000504387 UNC93AQ86WB7 457 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 PTRH1Q86Y79 214 aaKnown RBP7.46□□□□□ -1.22
NEDD9-208ENST00000504387 CNTN4Q8IWV2 1026 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 CRYBG2Q8N1P7 616 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 CFAP52Q8N1V2 620 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 LIX1Q8N485 282 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 IL17RDQ8NFM7 739 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 OR5H6Q8NGV6 325 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 STAG3L4Q8TBR4 150 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 TMEM203Q969S6 136 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 LINGO1Q96FE5 620 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 PHOX2BQ99453 314 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 TRMOQ9BU70 441 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 DPY30Q9C005 99 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 SMPD4Q9NXE4 827 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 FBXL12Q9NXK8 326 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 NOD1Q9Y239 953 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 PRG3Q9Y2Y8 225 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-208ENST00000504387 ANGPTL3Q9Y5C1 460 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 MIA3Q5JRA6 1907 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 TRAV19A0A0A6YYK7 116 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 FAM234BA2RU67 622 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF487B1APH4 448 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 E5RI56 91 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 F8W810 466 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 ERVH48-1M5A8F1 160 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 WWP2O00308 870 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 DSCR3O14972 297 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 MATN3O15232 486 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 BNIP3LO60238 219 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 CPSF4O95639 269 aaKnown RBP7.46□□□□□ -1.22
NEDD9-208ENST00000504387 CKMT1AP12532 417 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 PRKACBP22694 351 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 ERVK-8P63133 956 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 RPP38P78345 283 aaKnown RBP7.46□□□□□ -1.22
NEDD9-208ENST00000504387 SLC35A2P78381 396 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 NFE2L1Q14494 772 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 ALFQ53S48 1182 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 AGAP6Q5VW22 663 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 PDE12Q6L8Q7 609 aaKnown RBP7.46□□□□□ -1.22
NEDD9-208ENST00000504387 MBOAT1Q6ZNC8 495 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 OTOP2Q7RTS6 562 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF438Q7Z4V0 828 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 CYP4Z2PQ8N1L4 340 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 STX19Q8N4C7 294 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 OR4K2Q8NGD2 314 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 OR6F1Q8NGZ6 308 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 SNAPC3Q92966 411 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 YIPF6Q96EC8 236 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 L3HYPDHQ96EM0 354 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 MAP6Q96JE9 813 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 AGAP4Q96P64 663 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 ATOH8Q96SQ7 321 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 CDADC1Q9BWV3 514 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 ACTL8Q9H568 366 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 MROH8Q9H579 483 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 CPNE5Q9HCH3 593 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 NECTIN3Q9NQS3 549 aa7.46□□□□□ -1.22
NEDD9-208ENST00000504387 FBXO8Q9NRD0 319 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms