RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 NRACQ8N912 160 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 DRAXINQ8NBI3 349 aaPredicted RBP4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 DBF4BQ8NFT6 615 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 OR52K1Q8NGK4 314 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 OR52M1Q8NGK5 317 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 CFAP61Q8NHU2 1237 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 C16orf52Q8NHV5 167 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 C9orf43Q8TAL5 461 aaPredicted RBP4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 SLAMF9Q96A28 289 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 ZBTB9Q96C00 473 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 MRPL38Q96DV4 380 aaKnown RBP4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 SAMD8Q96LT4 415 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 SIGLEC11Q96RL6 698 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 CDRT15Q96T59 188 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 NAP1L3Q99457 506 aaPredicted RBP4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 SSX3Q99909 188 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 SEMA3CQ99985 751 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 TPPP3Q9BW30 176 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 PUS3Q9BZE2 481 aaKnown RBP4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 NUAK2Q9H093 628 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 STMN4Q9H169 189 aaPredicted RBP4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 TFB2MQ9H5Q4 396 aaKnown RBP4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 KIF9Q9HAQ2 790 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 SLC6A13Q9NSD5 602 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 TCP11L1Q9NUJ3 509 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 DNAJC11Q9NVH1 559 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 FAM118AQ9NWS6 357 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 SPG21Q9NZD8 308 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 RAI14Q9P0K7 980 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 KIAA1456Q9P272 454 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 ABI3Q9P2A4 366 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 GMEB2Q9UKD1 530 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 RCOR1Q9UKL0 485 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 SNX7Q9UNH6 387 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 SLC8A2Q9UPR5 921 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 ITM2BQ9Y287 266 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 DDX49Q9Y6V7 483 aaKnown RBP4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 U3KQV3 271 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 COL4A1P02462 1669 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 RIC1Q4ADV7 1423 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 SLX4Q8IY92 1834 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 ARFGEF1Q9Y6D6 1849 aa4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 DDX60Q8IY21 1712 aaKnown RBP4.18□□□□□ -1.74
PDLIM1P4-201ENST00000504327 LAMB2P55268 1798 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 LNP1A1A4G5 178 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 ARHGAP42A6NI28 874 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 YDJCA8MPS7 323 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 H0YIN7 160 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 H0YIV9 168 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 M0QZQ0 153 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 CXCL11O14625 94 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 POLR3GO15318 223 aaPredicted RBP4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 CLDN3O15551 220 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 NUDT21O43809 227 aaKnown RBP4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 CRCPO75575 148 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 EPN2O95208 641 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 KAT7O95251 611 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 PRAMEF12O95522 483 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 PTBP3O95758 552 aaKnown RBP4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 BCL10O95999 233 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 AK1P00568 194 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 FGBP02675 491 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 ASGR1P07306 291 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 HOXB5P09067 269 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 AREGP15514 252 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 GJA1P17302 382 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 CD9P21926 228 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 KLRC2P26717 231 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 PSMA5P28066 241 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 CDC25CP30307 473 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 CORO1AP31146 461 aaKnown RBP4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 CDAP32320 146 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 NR4A2P43354 598 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 KCNJ1P48048 391 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 DHPSP49366 369 aaPredicted RBP4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 ETV1P50549 477 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 PLCD1P51178 756 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 ARSEP51690 589 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 VCPP55072 806 aaKnown RBP4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 ID2Q02363 134 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 CXCL9Q07325 125 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 MZT1Q08AG7 82 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 GRSF1Q12849 480 aaKnown RBP eCLIP4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 RAPSNQ13702 412 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 UGP2Q16851 508 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 PFKFB3Q16875 520 aaPredicted RBP4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 HERC4Q5GLZ8 1057 aaPredicted RBP4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 SPATA46Q5T0L3 261 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 BEND3Q5T5X7 828 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 C10orf25Q5T742 122 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 SERTAD4-AS1Q5TG53 156 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 DHRS7BQ6IAN0 325 aaPredicted RBP4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 TMEM88Q6PEY1 159 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 C16orf89Q6UX73 402 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 INTS8Q75QN2 995 aaKnown RBP4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 TAS2R42Q7RTR8 314 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 TFAP2DQ7Z6R9 452 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 SYVN1Q86TM6 617 aa4.17□□□□□ -1.74
PDLIM1P4-201ENST00000504327 EXOC3L1Q86VI1 746 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms