RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 FBXO16Q8IX29 292 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 UBE2J2Q8N2K1 259 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 C10orf53Q8N6V4 93 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 NIPA2Q8N8Q9 360 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 POC5Q8NA72 575 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 GPRC5AQ8NFJ5 357 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 RORBQ92753 470 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF707Q96C28 371 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 RCN3Q96D15 328 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 RNFT2Q96EX2 444 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 OTUB1Q96FW1 271 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TRMT61AQ96FX7 289 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MARS2Q96GW9 593 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SH3YL1Q96HL8 342 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TEPSINQ96N21 525 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 FCRL3Q96P31 734 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SPSB2Q99619 263 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 KCTD14Q9BQ13 255 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC19A3Q9BZV2 496 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 HDHD2Q9H0R4 259 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CAB39LQ9H9S4 337 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 WDR41Q9HAD4 459 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SPACA1Q9HBV2 294 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PCDH9Q9HC56 1237 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TM9SF3Q9HD45 589 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ATP6V1HQ9UI12 483 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ATXN7L1Q9ULK2 861 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 KCNH4Q9UQ05 1017 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 BTRCQ9Y297 605 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TNPO3Q9Y5L0 923 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 A0A1B0GVC2 190 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 IQCMA0A1B0GVH7 501 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 A8MXE2 369 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PSMD12O00232 456 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PRRG1O14668 218 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TPP1O14773 563 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 DDX3YO15523 660 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 KLRC4O43908 158 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM20BO75063 409 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CCNDBP1O95273 360 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TNFAIP8O95379 198 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PLGP00747 810 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PDGFAP04085 211 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CYP11A1P05108 521 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ADRB2P07550 413 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 GJB1P08034 283 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 HOXC4P09017 264 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PRKAR1AP10644 381 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SRCP12931 536 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CYP4B1P13584 511 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CCDC130P13994 396 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ATF4P18848 351 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CYP2A7P20853 494 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 LRPAP1P30533 357 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 OPRL1P41146 370 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 HNF4AP41235 474 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ARCN1P48444 511 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 GSK3AP49840 483 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TKTL1P51854 596 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 RAD23AP54725 363 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 WDR4P57081 412 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TAS2R40P59535 323 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 RAC3P60763 192 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 RAB14P61106 215 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CTBP1Q13363 440 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ILKQ13418 452 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PTK6Q13882 451 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 DPYSL3Q14195 570 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MRPL58Q14197 206 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 STARD3Q14849 445 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC1A5Q15758 541 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 LY6KQ17RY6 165 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ATAT1Q5SQI0 421 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PRAMEF19Q5SWL8 479 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CATSPEREQ5SY80 951 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM91A1Q658Y4 838 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CDPF1Q6NVV7 123 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 KLHL17Q6TDP4 642 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF621Q6ZSS3 439 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CLNKQ7Z7G1 428 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ADHFE1Q8IWW8 467 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ZDHHC14Q8IZN3 488 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM26EQ8N5C1 309 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 NKAPQ8N5F7 415 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 C3orf58Q8NDZ4 430 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PIWIL2Q8TC59 973 aaKnown RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ADAMTS18Q8TE60 1221 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 HTRA1Q92743 480 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MCRS1Q96EZ8 462 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 BTN2A3PQ96KV6 586 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MAGEB10Q96LZ2 347 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 CITED4Q96RK1 184 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 RBBP8Q99708 897 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TMEM109Q9BVC6 243 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SPRTNQ9H040 489 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TOR3AQ9H497 397 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 BCAS3Q9H6U6 928 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ALG9Q9H6U8 611 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 NMRAL1Q9HBL8 299 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ZFP14Q9HCL3 533 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms