RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 KIAA0930Q6ICG6 404 aaPredicted RBP14.86□□□□□ -0.03
NUP50-219ENST00000497960 PWWP2BQ6NUJ5 590 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 ZDHHC24Q6UX98 284 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 ANKMY2Q8IV38 441 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 ZBED8Q8IZ13 594 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 SLC22A15Q8IZD6 547 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 AGGF1Q8N302 714 aaeCLIP14.86□□□□□ -0.03
NUP50-219ENST00000497960 FBXO36Q8NEA4 188 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 OR5K2Q8NHB8 316 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 GSDMBQ8TAX9 411 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 PPM1MQ96MI6 270 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 CATSPER2Q96P56 530 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 TRIM56Q9BRZ2 755 aaKnown RBP14.86□□□□□ -0.03
NUP50-219ENST00000497960 FAM129AQ9BZQ8 928 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 SYTL2Q9HCH5 934 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 SAYSD1Q9NPB0 183 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 ACTR10Q9NZ32 417 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 IL17BQ9UHF5 180 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 ICKQ9UPZ9 632 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 PIPSLA2A3N6 862 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 IQCF5A8MTL0 148 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 KPNA5O15131 536 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 EIF3HO15372 352 aaKnown RBP eCLIP14.85□□□□□ -0.03
NUP50-219ENST00000497960 NKX2-8O15522 239 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 C1QL1O75973 258 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 TIAF1O95411 115 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 RPN2P04844 631 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 RPS3P23396 243 aaKnown RBP eCLIP14.85□□□□□ -0.03
NUP50-219ENST00000497960 DLSTP36957 453 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 EIF3BP55884 814 aaKnown RBP14.85□□□□□ -0.03
NUP50-219ENST00000497960 CUL1Q13616 776 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 CRYMQ14894 314 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 GPR19Q15760 415 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 LINC00303Q3SY05 128 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 ANKRD20A4Q4UJ75 823 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 RNF187Q5TA31 235 aaPredicted RBP14.85□□□□□ -0.03
NUP50-219ENST00000497960 UNC5AQ6ZN44 842 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 TMEM126BQ8IUX1 230 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 IFT20Q8IY31 132 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 ADGRF3Q8IZF5 1079 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 KRT222Q8N1A0 295 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 ZNF843Q8N446 348 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.85□□□□□ -0.03
NUP50-219ENST00000497960 LKAAEAR1Q8TD35 194 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 STARD8Q92502 1023 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 TCF12Q99081 682 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 FMO2Q99518 471 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 EBNA1BP2Q99848 306 aaKnown RBP14.85□□□□□ -0.03
NUP50-219ENST00000497960 NAT9Q9BTE0 207 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 PITPNM3Q9BZ71 974 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 PHACTR1Q9C0D0 580 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 OR6C2Q9NZP2 312 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 ZC3H7BQ9UGR2 993 aaKnown RBP14.85□□□□□ -0.03
NUP50-219ENST00000497960 KCND3Q9UK17 655 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 CROTQ9UKG9 612 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 PIEZO2Q9H5I5 2752 aa14.85□□□□□ -0.03
NUP50-219ENST00000497960 SEC16AO15027 2179 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 E7ESA3 106 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 GPC4O75487 556 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 SCRG1O75711 98 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 TTC4O95801 387 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 NTRK1P04629 796 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 PRKAR1AP10644 381 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 SFTPCP11686 197 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 TCN2P20062 427 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 ARNTP27540 789 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 AOAHP28039 575 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 ABRQ12979 859 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 FASTKD3Q14CZ7 662 aaKnown RBP14.84□□□□□ -0.03
NUP50-219ENST00000497960 LONRF1Q17RB8 773 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 SPANXN3Q5MJ09 141 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 BORAQ6PGQ7 559 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 SPESP1Q6UW49 350 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 OTOAQ7RTW8 1153 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 CFAP61Q8NHU2 1237 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 ZNF501Q96CX3 271 aaPredicted RBP14.84□□□□□ -0.03
NUP50-219ENST00000497960 NRTNQ99748 197 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 WDR83Q9BRX9 315 aaKnown RBP14.84□□□□□ -0.03
NUP50-219ENST00000497960 SEMA4CQ9C0C4 833 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 P2RY12Q9H244 342 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 LHX9Q9NQ69 397 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 LATS2Q9NRM7 1088 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 ZDHHC18Q9NUE0 388 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 IL1RAPL1Q9NZN1 696 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 PCDHB3Q9Y5E6 796 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 TEX264Q9Y6I9 313 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 SPTBP11277 2137 aa14.84□□□□□ -0.03
NUP50-219ENST00000497960 GOLGA8KD6RF30 607 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 H3BMM5 538 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 GOLGA8TH3BQL2 631 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 CPNE3O75131 537 aaKnown RBP14.83□□□□□ -0.04
NUP50-219ENST00000497960 KATNA1O75449 491 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 SLCO2B1O94956 709 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 CHRM5P08912 532 aaPredicted RBP14.83□□□□□ -0.04
NUP50-219ENST00000497960 FAM87AP0C7U9 286 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 ST6GAL1P15907 406 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 CCR10P46092 362 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 CARSP49589 748 aaKnown RBP14.83□□□□□ -0.04
NUP50-219ENST00000497960 CDC20Q12834 499 aa14.83□□□□□ -0.04
NUP50-219ENST00000497960 THOC5Q13769 683 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms