RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 PRKG2Q13237 762 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 TRIM14Q14142 442 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.82■□□□□ 0.12
VIM-208ENST00000497849 KDELC1Q6UW63 502 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 GLT6D1Q7Z4J2 308 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 FAM20CQ8IXL6 584 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 SLC25A41Q8N5S1 370 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 OR8K1Q8NGG5 319 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 BLOC1S5Q8TDH9 187 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 IQCDQ96DY2 449 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 OLFM3Q96PB7 478 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 HGH1Q9BTY7 390 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 SLC26A1Q9H2B4 701 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 SOX17Q9H6I2 414 aaPredicted RBP15.82■□□□□ 0.12
VIM-208ENST00000497849 MRM3Q9HC36 420 aaKnown RBP15.82■□□□□ 0.12
VIM-208ENST00000497849 SPHK1Q9NYA1 384 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 SEC14L3Q9UDX4 400 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 MAP1AP78559 2803 aaPredicted RBP15.81■□□□□ 0.12
VIM-208ENST00000497849 A0A0A6YYK5 440 aaPredicted RBP15.81■□□□□ 0.12
VIM-208ENST00000497849 TRAV17A0A0B4J275 112 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 CYP1A2P05177 515 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 TPM1P09493 284 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 CD1EP15812 388 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 ACANP16112 2415 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 PDHA2P29803 388 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 CDC25BP30305 580 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 CD68P34810 354 aaPredicted RBP15.81■□□□□ 0.12
VIM-208ENST00000497849 PRLHRP49683 370 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 WNT3AP56704 352 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 BOP1Q14137 746 aaKnown RBP15.81■□□□□ 0.12
VIM-208ENST00000497849 SLC5A12Q1EHB4 618 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 ZNF658BQ4V348 819 aaPredicted RBP15.81■□□□□ 0.12
VIM-208ENST00000497849 TEX44Q53QW1 395 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 TTLL10Q6ZVT0 673 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 HOOK3Q86VS8 718 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 CEP97Q8IW35 865 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 CPAMD8Q8IZJ3 1885 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 TC2NQ8N9U0 490 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 ACBD4Q8NC06 268 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.81■□□□□ 0.12
VIM-208ENST00000497849 PSMF1Q92530 271 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 RAPGEF5Q92565 580 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 SYN2Q92777 582 aaPredicted RBP15.81■□□□□ 0.12
VIM-208ENST00000497849 CHP1Q99653 195 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 SPOCK3Q9BQ16 436 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 MVB12BQ9H7P6 319 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 COG4Q9H9E3 785 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 IRAK4Q9NWZ3 460 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 HACD3Q9P035 362 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 ABI3Q9P2A4 366 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 NEU2Q9Y3R4 380 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 PKP3Q9Y446 797 aa15.81■□□□□ 0.12
VIM-208ENST00000497849 C17orf113A0A1B0GUU1 675 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 CLDN14O95500 239 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 NADKO95544 446 aaPredicted RBP15.8■□□□□ 0.12
VIM-208ENST00000497849 KDELR1P24390 212 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 PTPN3P26045 913 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 SOX11P35716 441 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 CD151P48509 253 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 RBBP7Q16576 425 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 C3AR1Q16581 482 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 SLC9A4Q6AI14 798 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 NPNTQ6UXI9 565 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 UNC5AQ6ZN44 842 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 ADAMTS18Q8TE60 1221 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 CHTF18Q8WVB6 975 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 HAS2Q92819 552 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 PDLIM2Q96JY6 352 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 MRGPRX2Q96LB1 330 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 TEKT5Q96M29 485 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 DNAJC7Q99615 494 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 TMUB1Q9BVT8 246 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 ASB8Q9H765 288 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 ZNF160Q9HCG1 818 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 ABHD10Q9NUJ1 306 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 CTSFQ9UBX1 484 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 FAM153AQ9UHL3 310 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 PLCL2Q9UPR0 1127 aa15.8■□□□□ 0.12
VIM-208ENST00000497849 A0A0J9YY10 115 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 A0A1B0GX78 115 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 DYTNA2CJ06 578 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 AGAP14A8MT82 685 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 IFRD1O00458 451 aaPredicted RBP15.79■□□□□ 0.12
VIM-208ENST00000497849 SLC19A2O60779 497 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 HPP00738 406 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 F10P00742 488 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 EPOP01588 193 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 SERPING1P05155 500 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 TPBGLP0DKB5 382 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 SMSP52788 366 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 PDK1Q15118 436 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 SLC1A5Q15758 541 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 TFGQ92734 400 aaPredicted RBP15.79■□□□□ 0.12
VIM-208ENST00000497849 ENKD1Q9H0I2 346 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 SEMA3GQ9NS98 782 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 EURLQ9NYK6 297 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 PTGFRNQ9P2B2 879 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 TINAGQ9UJW2 476 aa15.79■□□□□ 0.12
VIM-208ENST00000497849 VSTM2BA6NLU5 285 aa15.78■□□□□ 0.12
VIM-208ENST00000497849 STX7O15400 261 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms