RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 KEAP1Q14145 624 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 GALNT3Q14435 633 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 NAA35Q5VZE5 725 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 ALS2CLQ60I27 953 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 PAMR1Q6UXH9 720 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 NAPRTQ6XQN6 538 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 ZNF547Q8IVP9 402 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 TRIM59Q8IWR1 403 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 GALNT12Q8IXK2 581 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 KBTBD2Q8IY47 623 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 PGBD5Q8N414 524 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 CCDC89Q8N998 374 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 SIMC1Q8NDZ2 872 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 JOSD2Q8TAC2 188 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 NSMCE1Q8WV22 266 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 CPA5Q8WXQ8 436 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 WDR24Q96S15 920 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 DMRTA2Q96SC8 542 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 GPATCH1Q9BRR8 931 aaKnown RBP9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 NAA15Q9BXJ9 866 aaKnown RBP9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 FZD10Q9ULW2 581 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 PSMD13Q9UNM6 376 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 ZNF232Q9UNY5 417 aa9.23□□□□□ -0.93
SMARCAL1-213ENST00000496037 EEF2KO00418 725 aaKnown RBP9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 MAP2K7O14733 419 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 ZSCAN9O15535 394 aaPredicted RBP9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 KCNJ13O60928 360 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 MTX2O75431 263 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 GNA14O95837 355 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 HPP00738 406 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 RAF1P04049 648 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 PNMA6AP0CW24 399 aaPredicted RBP9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 ST6GAL1P15907 406 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 ITGAXP20702 1163 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 GPD1P21695 349 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 HOXC12P31275 282 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 ZNF165P49910 485 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 NDUFA8P51970 172 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 ALDH6A1Q02252 535 aaKnown RBP9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 APBA1Q02410 837 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 SETDB1Q15047 1291 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 ANKRD20A8PQ5CZ79 823 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 TTI2Q6NXR4 508 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 CDHR3Q6ZTQ4 885 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 TMEM151BQ8IW70 566 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 ARHGAP12Q8IWW6 846 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 SIRT6Q8N6T7 355 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 OR11G2Q8NGC1 345 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 BRIX1Q8TDN6 353 aaKnown RBP9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 SLC20A1Q8WUM9 679 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 TMEM158Q8WZ71 300 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 GLYATL1Q969I3 302 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 FKBP10Q96AY3 582 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 COX4I2Q96KJ9 171 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 ZSCAN5AQ9BUG6 496 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 RNF32Q9H0A6 362 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 KLHL25Q9H0H3 589 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 WDR54Q9H977 334 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 ZNF160Q9HCG1 818 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 IL17CQ9P0M4 197 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 SLC24A2Q9UI40 661 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 CFAP20Q9Y6A4 193 aaKnown RBP9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 AKAP6Q13023 2319 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 HIVEP2P31629 2446 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 DOCK10Q96BY6 2186 aa9.22□□□□□ -0.93
SMARCAL1-213ENST00000496037 OR5H15A6NDH6 313 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 NPIPA5E9PKD4 350 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 TOXO94900 526 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 WDPCPO95876 746 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 SPTBP11277 2137 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 PIM1P11309 404 aaPredicted RBP9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 KRT3P12035 628 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 ACPPP15309 386 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 DESP17661 470 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 SLC9A1P19634 815 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 CA4P22748 312 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 MMP13P45452 471 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 STX17P56962 302 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 NOMO3P69849 1222 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 DEFB110Q30KQ9 67 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 PDPK2PQ6A1A2 396 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 ATL3Q6DD88 541 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 HIBCHQ6NVY1 386 aaPredicted RBP9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 GBP6Q6ZN66 633 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 CEP128Q6ZU80 1094 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 CHSY3Q70JA7 882 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 HOOK3Q86VS8 718 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 AMZ2Q86W34 360 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 DOLPP1Q86YN1 238 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 FAM20CQ8IXL6 584 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 ZZZ3Q8IYH5 903 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 GHDCQ8N2G8 530 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 ZNF655Q8N720 491 aaPredicted RBP9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 NPWQ8N729 165 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 LPCAT1Q8NF37 534 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 LILRB4Q8NHJ6 448 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 ENOX1Q8TC92 643 aaKnown RBP9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 PWWP2AQ96N64 755 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 SELENOOQ9BVL4 669 aa9.21□□□□□ -0.94
SMARCAL1-213ENST00000496037 SARGQ9BW04 601 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms