RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	GLIPR1L2	Q4G1C9	344 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	DCAF17	Q5H9S7	520 aa	Predicted RBP	4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	MS4A13	Q5J8X5	152 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	RBM20	Q5T481	1227 aa	Known RBP	4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	FAM69A	Q5T7M9	428 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	LIPM	Q5VYY2	423 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	NUGGC	Q68CJ6	796 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	ATL3	Q6DD88	541 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	NAPEPLD	Q6IQ20	393 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	GRHL2	Q6ISB3	625 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	PMF1	Q6P1K2	205 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	LCLAT1	Q6UWP7	414 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	CIR1	Q86X95	450 aa	Predicted RBP	4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	MFN1	Q8IWA4	741 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	SIX6OS1	Q8N1H7	587 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	TTC39C	Q8N584	583 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	KDM1B	Q8NB78	822 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	OR2T34	Q8NGX1	318 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	NFKBID	Q8NI38	313 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	FIBIN	Q8TAL6	211 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	LMO3	Q8TAP4	145 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	SPATA20	Q8TB22	786 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	UBA3	Q8TBC4	463 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	SLC35F5	Q8WV83	523 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	IRGQ	Q8WZA9	623 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	NPIPB3	Q92617	1050 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	DACT3	Q96B18	629 aa	Predicted RBP	4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	PERP	Q96FX8	193 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	WDYHV1	Q96HA8	205 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	PRMT1	Q99873	361 aa	Known RBP	4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	SEMA3C	Q99985	751 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	FUCA2	Q9BTY2	467 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	MEGF9	Q9H1U4	602 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	C12orf65	Q9H3J6	166 aa	Known RBP	4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	MSL2	Q9HCI7	577 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	FBXL12	Q9NXK8	326 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	SERTAD3	Q9UJW9	196 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	RCOR1	Q9UKL0	485 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	SCML1	Q9UN30	329 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	CAMK2A	Q9UQM7	478 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981		U3KQA8	63 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	TACC2	O95359	2948 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	DOCK4	Q8N1I0	1966 aa		4.27	□□□□□ -1.73
VPS52-222	ENST00000495981	EDDM13	A0A1B0GTR0	161 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981		A0A1W2PS29	197 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	MROH6	A6NGR9	719 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	AGAP5	A6NIR3	686 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981		I6L893	689 aa	Predicted RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	RNF103	O00237	685 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	PEX12	O00623	359 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	YKT6	O15498	198 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	SLC7A4	O43246	635 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	PLRG1	O43660	514 aa	Known RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ACSL4	O60488	711 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	CDC14B	O60729	498 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	SDC3	O75056	442 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	WDR47	O94967	919 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ATP5B	P06576	529 aa	Known RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	CTSL	P07711	333 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	PAEP	P09466	180 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	C1S	P09871	688 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	EPB41	P11171	864 aa	Known RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	KRT13	P13646	458 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	CHN1	P15882	459 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	TRIM21	P19474	475 aa	Known RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ITGAL	P20701	1170 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	IL11	P20809	199 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	TBXAS1	P24557	533 aa	Predicted RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ACP1	P24666	158 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	EPHA3	P29320	983 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	THBS4	P35443	961 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	HADHA	P40939	763 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	SYK	P43405	635 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	NUMB	P49757	651 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	RGS7	P49802	495 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	FOXL2	P58012	376 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	TAS2R38	P59533	333 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ERVPABLB-1	P60509	514 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	RPL15	P61313	204 aa	Known RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	IFI35	P80217	286 aa	Predicted RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	NHLH2	Q02577	135 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	PNOC	Q13519	176 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	DYRK1A	Q13627	763 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	E2F2	Q14209	437 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ELAVL1	Q15717	326 aa	Known RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ZSCAN23	Q3MJ62	389 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	TBRG1	Q3YBR2	411 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	DCAF6	Q58WW2	860 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	UBAP2	Q5T6F2	1119 aa	Known RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	PIP5KL1	Q5T9C9	394 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	DEPDC1	Q5TB30	811 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	SLC9A4	Q6AI14	798 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	CCDC144NL	Q6NUI1	221 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	C16orf89	Q6UX73	402 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	GCNT7	Q6ZNI0	430 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	TRIM69	Q86WT6	500 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	MMAA	Q8IVH4	418 aa	Known RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ARHGEF19	Q8IW93	802 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms