RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 IFT80Q9P2H3 777 aaPredicted RBP22.41■■□□□ 1.18
COL27A1-208ENST00000494780 PTRH2Q9Y3E5 179 aaKnown RBP22.41■■□□□ 1.18
COL27A1-208ENST00000494780 PCSK5Q92824 1860 aa22.41■■□□□ 1.18
COL27A1-208ENST00000494780 PEX12O00623 359 aa22.4■■□□□ 1.18
COL27A1-208ENST00000494780 KLHL41O60662 606 aa22.4■■□□□ 1.18
COL27A1-208ENST00000494780 GAS8O95995 478 aa22.4■■□□□ 1.18
COL27A1-208ENST00000494780 CCDC38Q502W7 563 aa22.4■■□□□ 1.18
COL27A1-208ENST00000494780 NAPRTQ6XQN6 538 aa22.4■■□□□ 1.18
COL27A1-208ENST00000494780 KIAA1328Q86T90 577 aa22.4■■□□□ 1.18
COL27A1-208ENST00000494780 DNAJC22Q8N4W6 341 aa22.4■■□□□ 1.18
COL27A1-208ENST00000494780 TAB3Q8N5C8 712 aaPredicted RBP22.4■■□□□ 1.18
COL27A1-208ENST00000494780 DNAAF3Q8N9W5 541 aa22.4■■□□□ 1.18
COL27A1-208ENST00000494780 CLEC1AQ8NC01 280 aa22.4■■□□□ 1.18
COL27A1-208ENST00000494780 OR52K1Q8NGK4 314 aa22.4■■□□□ 1.18
COL27A1-208ENST00000494780 OR2Y1Q8NGV0 311 aa22.4■■□□□ 1.18
COL27A1-208ENST00000494780 TXLNGQ9NUQ3 528 aa22.4■■□□□ 1.18
COL27A1-208ENST00000494780 PLEKHB1Q9UF11 243 aaPredicted RBP22.4■■□□□ 1.18
COL27A1-208ENST00000494780 NDOR1Q9UHB4 597 aa22.4■■□□□ 1.18
COL27A1-208ENST00000494780 PACSIN2Q9UNF0 486 aaPredicted RBP22.4■■□□□ 1.18
COL27A1-208ENST00000494780 PLCL2Q9UPR0 1127 aa22.4■■□□□ 1.18
COL27A1-208ENST00000494780 ICE1Q9Y2F5 2266 aa22.4■■□□□ 1.18
COL27A1-208ENST00000494780 ESPL1Q14674 2120 aa22.39■■□□□ 1.18
COL27A1-208ENST00000494780 FER1L5A0AVI2 2057 aa22.39■■□□□ 1.17
COL27A1-208ENST00000494780 HEATR9A2RTY3 570 aa22.39■■□□□ 1.17
COL27A1-208ENST00000494780 ISM1B1AKI9 464 aa22.39■■□□□ 1.17
COL27A1-208ENST00000494780 TCP11X1B4DZS4 312 aa22.39■■□□□ 1.17
COL27A1-208ENST00000494780 RAPSNQ13702 412 aa22.39■■□□□ 1.17
COL27A1-208ENST00000494780 KYNUQ16719 465 aa22.39■■□□□ 1.17
COL27A1-208ENST00000494780 DNAJC21Q5F1R6 531 aaKnown RBP22.39■■□□□ 1.17
COL27A1-208ENST00000494780 DCAF10Q5QP82 559 aa22.39■■□□□ 1.17
COL27A1-208ENST00000494780 AFTPHQ6ULP2 937 aa22.39■■□□□ 1.17
COL27A1-208ENST00000494780 ZNF655Q8N720 491 aaPredicted RBP22.39■■□□□ 1.17
COL27A1-208ENST00000494780 OR13J1Q8NGT2 312 aa22.39■■□□□ 1.17
COL27A1-208ENST00000494780 DHCR7Q9UBM7 475 aaKnown RBP22.39■■□□□ 1.17
COL27A1-208ENST00000494780 RIMKLBQ9ULI2 386 aa22.39■■□□□ 1.17
COL27A1-208ENST00000494780 PLAGL1Q9UM63 463 aa22.39■■□□□ 1.17
COL27A1-208ENST00000494780 OR1I1O60431 355 aa22.38■■□□□ 1.17
COL27A1-208ENST00000494780 SEMA7AO75326 666 aa22.38■■□□□ 1.17
COL27A1-208ENST00000494780 ALPPP05187 535 aa22.38■■□□□ 1.17
COL27A1-208ENST00000494780 PEBP1P30086 187 aaKnown RBP22.38■■□□□ 1.17
COL27A1-208ENST00000494780 STIP1P31948 543 aaKnown RBP22.38■■□□□ 1.17
COL27A1-208ENST00000494780 NKAIN1Q4KMZ8 207 aa22.38■■□□□ 1.17
COL27A1-208ENST00000494780 MRPL14Q6P1L8 145 aaKnown RBP22.38■■□□□ 1.17
COL27A1-208ENST00000494780 TXLNBQ8N3L3 684 aa22.38■■□□□ 1.17
COL27A1-208ENST00000494780 HDAC10Q969S8 669 aa22.38■■□□□ 1.17
COL27A1-208ENST00000494780 PTERQ96BW5 349 aa22.38■■□□□ 1.17
COL27A1-208ENST00000494780 RANBP9Q96S59 729 aa22.38■■□□□ 1.17
COL27A1-208ENST00000494780 NDC1Q9BTX1 674 aa22.38■■□□□ 1.17
COL27A1-208ENST00000494780 IRAK4Q9NWZ3 460 aa22.38■■□□□ 1.17
COL27A1-208ENST00000494780 MAP10Q9P2G4 905 aa22.38■■□□□ 1.17
COL27A1-208ENST00000494780 IMPACTQ9P2X3 320 aa22.38■■□□□ 1.17
COL27A1-208ENST00000494780 CDYLQ9Y232 598 aa22.38■■□□□ 1.17
COL27A1-208ENST00000494780 TCRBV7S2A1N4TA0A589 114 aa22.37■■□□□ 1.17
COL27A1-208ENST00000494780 SUN1O94901 812 aa22.37■■□□□ 1.17
COL27A1-208ENST00000494780 FTCDO95954 541 aa22.37■■□□□ 1.17
COL27A1-208ENST00000494780 GOT2P00505 430 aaKnown RBP22.37■■□□□ 1.17
COL27A1-208ENST00000494780 CTSBP07858 339 aa22.37■■□□□ 1.17
COL27A1-208ENST00000494780 PKLRP30613 574 aa22.37■■□□□ 1.17
COL27A1-208ENST00000494780 FDFT1P37268 417 aa22.37■■□□□ 1.17
COL27A1-208ENST00000494780 RAB28P51157 221 aa22.37■■□□□ 1.17
COL27A1-208ENST00000494780 KIF5AQ12840 1032 aa22.37■■□□□ 1.17
COL27A1-208ENST00000494780 MYBPC3Q14896 1274 aa22.37■■□□□ 1.17
COL27A1-208ENST00000494780 TSTD2Q5T7W7 516 aa22.37■■□□□ 1.17
COL27A1-208ENST00000494780 IGFL3Q6UXB1 125 aa22.37■■□□□ 1.17
COL27A1-208ENST00000494780 SLC22A15Q8IZD6 547 aa22.37■■□□□ 1.17
COL27A1-208ENST00000494780 IQCKQ8N0W5 287 aa22.37■■□□□ 1.17
COL27A1-208ENST00000494780 GALNT16Q8N428 558 aa22.37■■□□□ 1.17
COL27A1-208ENST00000494780 TSSK1BQ9BXA7 367 aa22.37■■□□□ 1.17
COL27A1-208ENST00000494780 P4HTMQ9NXG6 502 aa22.37■■□□□ 1.17
COL27A1-208ENST00000494780 UTP20O75691 2785 aaKnown RBP22.37■■□□□ 1.17
COL27A1-208ENST00000494780 CNOT3O75175 753 aaKnown RBP22.36■■□□□ 1.17
COL27A1-208ENST00000494780 RPN2P04844 631 aa22.36■■□□□ 1.17
COL27A1-208ENST00000494780 ADRA1DP25100 572 aa22.36■■□□□ 1.17
COL27A1-208ENST00000494780 CCR7P32248 378 aa22.36■■□□□ 1.17
COL27A1-208ENST00000494780 PPARGP37231 505 aaPredicted RBP22.36■■□□□ 1.17
COL27A1-208ENST00000494780 ACVR1Q04771 509 aa22.36■■□□□ 1.17
COL27A1-208ENST00000494780 MRPL49Q13405 166 aaKnown RBP22.36■■□□□ 1.17
COL27A1-208ENST00000494780 EIF2S3LQ2VIR3 472 aaKnown RBP22.36■■□□□ 1.17
COL27A1-208ENST00000494780 PPP1R21Q6ZMI0 780 aa22.36■■□□□ 1.17
COL27A1-208ENST00000494780 OR4L1Q8NH43 312 aa22.36■■□□□ 1.17
COL27A1-208ENST00000494780 DLG3Q92796 817 aa22.36■■□□□ 1.17
COL27A1-208ENST00000494780 HES6Q96HZ4 224 aa22.36■■□□□ 1.17
COL27A1-208ENST00000494780 ETNK1Q9HBU6 452 aa22.36■■□□□ 1.17
COL27A1-208ENST00000494780 EURLQ9NYK6 297 aa22.36■■□□□ 1.17
COL27A1-208ENST00000494780 SLC2A6Q9UGQ3 507 aa22.36■■□□□ 1.17
COL27A1-208ENST00000494780 B3GNT3Q9Y2A9 372 aa22.36■■□□□ 1.17
COL27A1-208ENST00000494780 IPO13O94829 963 aaKnown RBP22.35■■□□□ 1.17
COL27A1-208ENST00000494780 DDAH2O95865 285 aa22.35■■□□□ 1.17
COL27A1-208ENST00000494780 CSE1LP55060 971 aaKnown RBP22.35■■□□□ 1.17
COL27A1-208ENST00000494780 SOX8P57073 446 aa22.35■■□□□ 1.17
COL27A1-208ENST00000494780 SLC9A5Q14940 896 aa22.35■■□□□ 1.17
COL27A1-208ENST00000494780 PLEKHN1Q494U1 663 aaPredicted RBP22.35■■□□□ 1.17
COL27A1-208ENST00000494780 ZNF534Q76KX8 674 aa22.35■■□□□ 1.17
COL27A1-208ENST00000494780 NLRP9Q7RTR0 991 aa22.35■■□□□ 1.17
COL27A1-208ENST00000494780 PPP1R32Q7Z5V6 425 aa22.35■■□□□ 1.17
COL27A1-208ENST00000494780 DENND1AQ8TEH3 1009 aa22.35■■□□□ 1.17
COL27A1-208ENST00000494780 ASZ1Q8WWH4 475 aa22.35■■□□□ 1.17
COL27A1-208ENST00000494780 ATG4AQ8WYN0 398 aa22.35■■□□□ 1.17
COL27A1-208ENST00000494780 NACC2Q96BF6 587 aa22.35■■□□□ 1.17
COL27A1-208ENST00000494780 SLC22A18Q96BI1 424 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms