RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 HSPA4P34932 840 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 PRKCIP41743 596 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 PITX1P78337 314 aaPredicted RBP4.13□□□□□ -1.75
SMC4-224ENST00000494612 PTPRCAPQ14761 206 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 KIR2DS3Q14952 304 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 KRT71Q3SY84 523 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 ZNF672Q499Z4 452 aaPredicted RBP4.13□□□□□ -1.75
SMC4-224ENST00000494612 FAM133BQ5BKY9 247 aaKnown RBP4.13□□□□□ -1.75
SMC4-224ENST00000494612 MFSD12Q6NUT3 480 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 DET1Q7L5Y6 550 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 SLC26A9Q7LBE3 791 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 CCDC186Q7Z3E2 898 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 TMEM139Q8IV31 216 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 CDK20Q8IZL9 346 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 ZNF843Q8N446 348 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 LMNTD1Q8N9Z9 388 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 OLIG1Q8TAK6 271 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 FGFBP3Q8TAT2 258 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 SSMEM1Q8WWF3 244 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 CFAP57Q96MR6 1250 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 MYADMQ96S97 322 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 RTP3Q9BQQ7 232 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 VN1R1Q9GZP7 353 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 TFB2MQ9H5Q4 396 aaKnown RBP4.13□□□□□ -1.75
SMC4-224ENST00000494612 BICC1Q9H694 974 aaKnown RBP4.13□□□□□ -1.75
SMC4-224ENST00000494612 FLT1P17948 1338 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 PBRM1Q86U86 1689 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 FGD5Q6ZNL6 1462 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 KIF13AQ9H1H9 1805 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 GAPDHSO14556 408 aaPredicted RBP4.12□□□□□ -1.75
SMC4-224ENST00000494612 PTAFRP25105 342 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 HOXA1P49639 335 aaPredicted RBP4.12□□□□□ -1.75
SMC4-224ENST00000494612 POLR2LP62875 67 aaKnown RBP4.12□□□□□ -1.75
SMC4-224ENST00000494612 CX3CL1P78423 397 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 RBBP5Q15291 538 aaKnown RBP4.12□□□□□ -1.75
SMC4-224ENST00000494612 UGP2Q16851 508 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 DCAF10Q5QP82 559 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 WBP2NLQ6ICG8 309 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 FAM198BQ6UWH4 519 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 NUP54Q7Z3B4 507 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 ADCK2Q7Z695 626 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 CCAR2Q8N163 923 aaKnown RBP4.12□□□□□ -1.75
SMC4-224ENST00000494612 KBTBD8Q8NFY9 601 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 LRRC8CQ8TDW0 803 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 GBP5Q96PP8 586 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 BTBD10Q9BSF8 475 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 KATNB1Q9BVA0 655 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 TCF7L2Q9NQB0 619 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 SERINC1Q9NRX5 453 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 CHCHD3Q9NX63 227 aaKnown RBP4.12□□□□□ -1.75
SMC4-224ENST00000494612 TBC1D7Q9P0N9 293 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 DAPK2Q9UIK4 370 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 MTUS1Q9ULD2 1270 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 SLC7A7Q9UM01 511 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 TMED3Q9Y3Q3 217 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 RIPK3Q9Y572 518 aa4.12□□□□□ -1.75
SMC4-224ENST00000494612 SOS1Q07889 1333 aaPredicted RBP4.12□□□□□ -1.75
SMC4-224ENST00000494612 ERCC6L2Q5T890 1561 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 ARHGEF37A1IGU5 675 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 CIDEAO60543 219 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 TBCAO75347 108 aaKnown RBP4.11□□□□□ -1.75
SMC4-224ENST00000494612 ATP5BP06576 529 aaKnown RBP4.11□□□□□ -1.75
SMC4-224ENST00000494612 RAB40ALP0C0E4 278 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 CD22P20273 847 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 CRKLP46109 303 aaKnown RBP4.11□□□□□ -1.75
SMC4-224ENST00000494612 NPY4RP50391 375 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 LINC01547P58512 204 aaPredicted RBP4.11□□□□□ -1.75
SMC4-224ENST00000494612 ZNF415Q09FC8 603 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 ILF3Q12906 894 aaKnown RBP eCLIP4.11□□□□□ -1.75
SMC4-224ENST00000494612 VEZF1Q14119 521 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 HYAL4Q2M3T9 481 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 TCTE1Q5JU00 501 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 PLA2G4FQ68DD2 849 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 CAVIN1Q6NZI2 390 aaKnown RBP4.11□□□□□ -1.75
SMC4-224ENST00000494612 GALNTL5Q7Z4T8 443 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 FAM219AQ8IW50 185 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 GPALPP1Q8IXQ4 340 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 RFLNBQ8N5W9 214 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 TRIML1Q8N9V2 468 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 OR2T12Q8NG77 320 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 OR11H4Q8NGC9 324 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 OR1J1Q8NGS3 322 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 IRGQQ8WZA9 623 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 SPSB1Q96BD6 273 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 FEVQ99581 238 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 CPNE1Q99829 537 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 RHNO1Q9BSD3 238 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 PFDN4Q9NQP4 134 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 LRWD1Q9UFC0 647 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 IL17BQ9UHF5 180 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 ABT1Q9ULW3 272 aaKnown RBP4.11□□□□□ -1.75
SMC4-224ENST00000494612 PCDH11YQ9BZA8 1340 aa4.11□□□□□ -1.75
SMC4-224ENST00000494612 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 A0A1W2PPQ1 181 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 NEMP2A6NFY4 417 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 DNM1LO00429 736 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 AP5Z1O43299 807 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 FGF17O60258 216 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 CAVIN2O95810 425 aa4.1□□□□□ -1.75
SMC4-224ENST00000494612 WDPCPO95876 746 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms