RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 TMEM181Q9P2C4 612 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 STOX2Q9P2F5 926 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-225ENST00000494465 CROTQ9UKG9 612 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 GPR34Q9UPC5 381 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 MTCH2Q9Y6C9 303 aa16.1■□□□□ 0.17
ATG4B-225ENST00000494465 A0A1W2PP18 115 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 H3BM21 787 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 SLC28A1O00337 649 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 ACOT8O14734 319 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 RGS14O43566 566 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 RNASEH1O60930 286 aaKnown RBP16.09■□□□□ 0.17
ATG4B-225ENST00000494465 CATP04040 527 aaKnown RBP16.09■□□□□ 0.17
ATG4B-225ENST00000494465 G6PDP11413 515 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 MAP4P27816 1152 aaKnown RBP16.09■□□□□ 0.17
ATG4B-225ENST00000494465 IL23RQ5VWK5 629 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 KLHDC8AQ8IYD2 350 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 RGL4Q8IZJ4 473 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 PCYOX1LQ8NBM8 494 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 FAM156AQ8NDB6 213 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 CSGALNACT1Q8TDX6 532 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 SLC26A7Q8TE54 656 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 ZNF514Q96K75 400 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-225ENST00000494465 CCDC138Q96M89 665 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 MKRN2Q9H000 416 aaKnown RBP16.09■□□□□ 0.17
ATG4B-225ENST00000494465 SPAG4Q9NPE6 437 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 TMEM45AQ9NWC5 275 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 CD300AQ9UGN4 299 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 C17orf113A0A1B0GUU1 675 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 PRORSD1PA6NEY8 169 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 TRIM38O00635 465 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 ANGPT2O15123 496 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 MAP3K7O43318 606 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 CTHP32929 405 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 YBX1P67809 324 aaKnown RBP16.09■□□□□ 0.17
ATG4B-225ENST00000494465 NUMA1Q14980 2115 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 AGERQ15109 404 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 SGO1Q5FBB7 561 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 TMEM196Q5HYL7 178 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 CYP20A1Q6UW02 462 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 HEATR4Q86WZ0 1026 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 HIPK4Q8NE63 616 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 VPS33AQ96AX1 596 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 PKP4Q99569 1192 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 GABRG3Q99928 467 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 LGR4Q9BXB1 951 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 CIDEBQ9UHD4 219 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 TMEM98Q9Y2Y6 226 aa16.09■□□□□ 0.17
ATG4B-225ENST00000494465 POLR3HQ9Y535 204 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-225ENST00000494465 ADAM23O75077 832 aa16.08■□□□□ 0.17
ATG4B-225ENST00000494465 POP7O75817 140 aaKnown RBP16.08■□□□□ 0.17
ATG4B-225ENST00000494465 PCDH8O95206 1070 aa16.08■□□□□ 0.17
ATG4B-225ENST00000494465 C1orf105O95561 183 aa16.08■□□□□ 0.17
ATG4B-225ENST00000494465 SLC16A8O95907 504 aa16.08■□□□□ 0.17
ATG4B-225ENST00000494465 PDYNP01213 254 aa16.08■□□□□ 0.17
ATG4B-225ENST00000494465 PCCBP05166 539 aa16.08■□□□□ 0.17
ATG4B-225ENST00000494465 IMPA1P29218 277 aa16.08■□□□□ 0.17
ATG4B-225ENST00000494465 MAPK9P45984 424 aa16.08■□□□□ 0.17
ATG4B-225ENST00000494465 POLR2JP52435 117 aaKnown RBP16.08■□□□□ 0.17
ATG4B-225ENST00000494465 GTF2H3Q13889 308 aa16.08■□□□□ 0.17
ATG4B-225ENST00000494465 FGL2Q14314 439 aa16.08■□□□□ 0.17
ATG4B-225ENST00000494465 SMU1Q2TAY7 513 aa16.08■□□□□ 0.17
ATG4B-225ENST00000494465 AGTRAPQ6RW13 159 aa16.08■□□□□ 0.17
ATG4B-225ENST00000494465 CRTC3Q6UUV7 619 aa16.08■□□□□ 0.17
ATG4B-225ENST00000494465 LRRC74BQ6ZQY2 392 aa16.08■□□□□ 0.17
ATG4B-225ENST00000494465 FBXO15Q8NCQ5 510 aaPredicted RBP16.08■□□□□ 0.17
ATG4B-225ENST00000494465 FAM131CQ96AQ9 280 aa16.08■□□□□ 0.17
ATG4B-225ENST00000494465 ACPTQ9BZG2 426 aa16.08■□□□□ 0.17
ATG4B-225ENST00000494465 ZFR2Q9UPR6 939 aaKnown RBP16.08■□□□□ 0.17
ATG4B-225ENST00000494465 FAM234BA2RU67 622 aa16.08■□□□□ 0.16
ATG4B-225ENST00000494465 H3BNX3 289 aa16.08■□□□□ 0.16
ATG4B-225ENST00000494465 BCAS2O75934 225 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-225ENST00000494465 RSL1D1O76021 490 aaKnown RBP16.08■□□□□ 0.16
ATG4B-225ENST00000494465 KRT6AP02538 564 aa16.08■□□□□ 0.16
ATG4B-225ENST00000494465 KRT6BP04259 564 aa16.08■□□□□ 0.16
ATG4B-225ENST00000494465 SLC2A4P14672 509 aa16.08■□□□□ 0.16
ATG4B-225ENST00000494465 NTSR1P30989 418 aa16.08■□□□□ 0.16
ATG4B-225ENST00000494465 KRT6CP48668 564 aa16.08■□□□□ 0.16
ATG4B-225ENST00000494465 KCNK10P57789 538 aa16.08■□□□□ 0.16
ATG4B-225ENST00000494465 RPL38P63173 70 aaKnown RBP16.08■□□□□ 0.16
ATG4B-225ENST00000494465 CDK3Q00526 305 aa16.08■□□□□ 0.16
ATG4B-225ENST00000494465 TLR1Q15399 786 aa16.08■□□□□ 0.16
ATG4B-225ENST00000494465 ZNF776Q68DI1 518 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-225ENST00000494465 THOC6Q86W42 341 aaKnown RBP16.08■□□□□ 0.16
ATG4B-225ENST00000494465 ZFAND4Q86XD8 727 aa16.08■□□□□ 0.16
ATG4B-225ENST00000494465 OR2T3Q8NH03 318 aa16.08■□□□□ 0.16
ATG4B-225ENST00000494465 OR2L2Q8NH16 312 aa16.08■□□□□ 0.16
ATG4B-225ENST00000494465 MTFMTQ96DP5 389 aaKnown RBP16.08■□□□□ 0.16
ATG4B-225ENST00000494465 NECTIN4Q96NY8 510 aa16.08■□□□□ 0.16
ATG4B-225ENST00000494465 OR4K3Q96R72 315 aa16.08■□□□□ 0.16
ATG4B-225ENST00000494465 MBNL1Q9NR56 388 aaKnown RBP16.08■□□□□ 0.16
ATG4B-225ENST00000494465 ANGPTL2Q9UKU9 493 aa16.08■□□□□ 0.16
ATG4B-225ENST00000494465 EEDO75530 441 aaKnown RBP16.07■□□□□ 0.16
ATG4B-225ENST00000494465 EGFP01133 1207 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 TCN1P20061 433 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-225ENST00000494465 CD22P20273 847 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 GNPDA1P46926 289 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 FLOT2Q14254 428 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 NFE2L1Q14494 772 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 KIAA0040Q15053 153 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 PAGE3Q5JUK9 113 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms