RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 TFB2MQ9H5Q4 396 aaKnown RBP11.3□□□□□ -0.6
UBA3-211ENST00000493957 SIDT1Q9NXL6 827 aaKnown RBP11.3□□□□□ -0.6
UBA3-211ENST00000493957 EPHA6Q9UF33 1036 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 POMT2Q9UKY4 750 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 ZFHX4Q86UP3 3567 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 TCRBV9S1A1TA0A576 114 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 ARHGEF33A8MVX0 844 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 KPNA5O15131 536 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 C1orf105O95561 183 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 ITGA2BP08514 1039 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 CHRM5P08912 532 aaPredicted RBP11.29□□□□□ -0.6
UBA3-211ENST00000493957 ANKRD34CP0C6C1 535 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 RBMS1P29558 406 aaKnown RBP11.29□□□□□ -0.6
UBA3-211ENST00000493957 KYNUQ16719 465 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 HECTD2Q5U5R9 776 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 ANKS6Q68DC2 871 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 UNC5DQ6UXZ4 953 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 CYHR1Q6ZMK1 362 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 KIAA0408Q6ZU52 694 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 PIWIL4Q7Z3Z4 852 aaKnown RBP11.29□□□□□ -0.6
UBA3-211ENST00000493957 STRA8Q7Z7C7 330 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 CLEC14AQ86T13 490 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 TAX1BP1Q86VP1 789 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 ZC3HC1Q86WB0 502 aaKnown RBP11.29□□□□□ -0.6
UBA3-211ENST00000493957 ZFAND4Q86XD8 727 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 DCUN1D3Q8IWE4 304 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 FAM20CQ8IXL6 584 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 PALM2Q8IXS6 379 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 CEP112Q8N8E3 955 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 GPATCH11Q8N954 259 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 LINC01555Q8NAE3 123 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 SNIP1Q8TAD8 396 aaKnown RBP11.29□□□□□ -0.6
UBA3-211ENST00000493957 KLHL6Q8WZ60 621 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 KCNJ9Q92806 393 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 ZDHHC12Q96GR4 267 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 TWSG1Q9GZX9 223 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 ZNF768Q9H5H4 540 aaKnown RBP11.29□□□□□ -0.6
UBA3-211ENST00000493957 LRRC4CQ9HCJ2 640 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 FAM114A2Q9NRY5 505 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 ACTR10Q9NZ32 417 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 ZFATQ9P243 1243 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 DHRS7Q9Y394 339 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 B3GALT1Q9Y5Z6 326 aa11.29□□□□□ -0.6
UBA3-211ENST00000493957 TLCD2A6NGC4 264 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 SLC9B1P1A6NJY1 282 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 FAM159BA6NKW6 160 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 VPS26AO75436 327 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 MATN4O95460 622 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 RHOXF2BP0C7M4 288 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 EBLN1P0CF75 366 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 ST6GAL1P15907 406 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 UGT2B7P16662 529 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 FDXRP22570 491 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 ITPKBP27987 946 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 PRDX3P30048 256 aaKnown RBP11.28□□□□□ -0.6
UBA3-211ENST00000493957 ATP5DP30049 168 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 SHMT2P34897 504 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 ERVPABLB-1P60509 514 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 SRSF6Q13247 344 aaKnown RBP11.28□□□□□ -0.6
UBA3-211ENST00000493957 ZNF460Q14592 562 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 ARMC6Q6NXE6 501 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 KLHL35Q6PF15 583 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 PAQR3Q6TCH7 311 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 C3orf62Q6ZUJ4 267 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 GALNT7Q86SF2 657 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 RASGRP3Q8IV61 690 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 DENND1AQ8TEH3 1009 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 IFT81Q8WYA0 676 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 INPP5DQ92835 1189 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 FGF11Q92914 225 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 ELMO2Q96JJ3 720 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 SLC41A2Q96JW4 573 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 ZNF578Q96N58 590 aaPredicted RBP11.28□□□□□ -0.6
UBA3-211ENST00000493957 OR2A14Q96R47 310 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 RHOXF2Q9BQY4 288 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 MCMBPQ9BTE3 642 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 PHACTR1Q9C0D0 580 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 THSD1Q9NS62 852 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 SLC39A1Q9NY26 324 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 NINJ2Q9NZG7 142 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 AKAP7Q9P0M2 348 aaPredicted RBP11.28□□□□□ -0.6
UBA3-211ENST00000493957 SEMA5BQ9P283 1151 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 POLG2Q9UHN1 485 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 TRMT6Q9UJA5 497 aaKnown RBP11.28□□□□□ -0.6
UBA3-211ENST00000493957 IKZF3Q9UKT9 509 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 COMMD10Q9Y6G5 202 aa11.28□□□□□ -0.6
UBA3-211ENST00000493957 PIPSLA2A3N6 862 aa11.27□□□□□ -0.61
UBA3-211ENST00000493957 B4E171 279 aa11.27□□□□□ -0.61
UBA3-211ENST00000493957 RASGRF2O14827 1237 aa11.27□□□□□ -0.61
UBA3-211ENST00000493957 PSIP1O75475 530 aaKnown RBP11.27□□□□□ -0.61
UBA3-211ENST00000493957 FAM155BO75949 473 aa11.27□□□□□ -0.61
UBA3-211ENST00000493957 FOLR1P15328 257 aa11.27□□□□□ -0.61
UBA3-211ENST00000493957 NELFEP18615 380 aaKnown RBP11.27□□□□□ -0.61
UBA3-211ENST00000493957 SAT1P21673 171 aa11.27□□□□□ -0.61
UBA3-211ENST00000493957 CDH3P22223 829 aa11.27□□□□□ -0.61
UBA3-211ENST00000493957 PSMB5P28074 263 aa11.27□□□□□ -0.61
UBA3-211ENST00000493957 GMPRP36959 345 aa11.27□□□□□ -0.61
UBA3-211ENST00000493957 EIF2S3P41091 472 aaKnown RBP11.27□□□□□ -0.61
UBA3-211ENST00000493957 TSPAN7P41732 249 aa11.27□□□□□ -0.61
UBA3-211ENST00000493957 PCBP4P57723 403 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms