RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 SNX33Q8WV41 574 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 FAM151AQ8WW52 585 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 SEMA4DQ92854 862 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 UPF1Q92900 1129 aaKnown RBP eCLIP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CRELD1Q96HD1 420 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 ART5Q96L15 291 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 Q96MT0 163 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 TREX2Q9BQ50 279 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 GLIS2Q9BZE0 524 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 PIGUQ9H490 435 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 CRLF2Q9HC73 371 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 AGPAT4Q9NRZ5 378 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 C14orf105Q9NVL8 296 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 HCN3Q9P1Z3 774 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF624Q9P2J8 865 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-205ENST00000493587 AASSQ9UDR5 926 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 DTX4Q9Y2E6 619 aa6.73□□□□□ -1.33
VPS13B-205ENST00000493587 WASHC1A8K0Z3 465 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 FAM86B1E9PN63 330 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 PDXKO00764 312 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 TPP1O14773 563 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 FABP7O15540 132 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 AKAP8O43823 692 aaKnown RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 PLOD3O60568 738 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 PMPCBO75439 489 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 NDUFB10O96000 172 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 HRGP04196 525 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 MPOP05164 745 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF37AP17032 561 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 RIDAP52758 137 aaKnown RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 SEMA3BQ13214 749 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 TMEM132BQ14DG7 1078 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 TOR1AIP1Q5JTV8 583 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 HECTD3Q5T447 861 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 REP15Q6BDI9 236 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 SUSD1Q6UWL2 747 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 FAM131AQ6UXB0 335 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 TMPRSS11AQ6ZMR5 421 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 TMEM179Q6ZVK1 233 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 EIF3MQ7L2H7 374 aaKnown RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 PLD5Q8N7P1 536 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 C19orf18Q8NEA5 215 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 CNIH3Q8TBE1 160 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 BLOC1S5Q8TDH9 187 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 ASB15Q8WXK1 588 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 MOCOSQ96EN8 888 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 C10orf90Q96M02 699 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 TBCDQ9BTW9 1192 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 CCDC32Q9BV29 185 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 RBCK1Q9BYM8 510 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 ACAD9Q9H845 621 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 NMUR1Q9HB89 426 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 ZBTB26Q9HCK0 441 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 SPHK1Q9NYA1 384 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 PIM2Q9P1W9 311 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 SEC14L4Q9UDX3 406 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 SEPT9Q9UHD8 586 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 RPS6KA6Q9UK32 745 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 PPIEQ9UNP9 301 aaKnown RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 RUVBL2Q9Y230 463 aaKnown RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 NDUFAF1Q9Y375 327 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 PCDHGB2Q9Y5G2 931 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 KLF2Q9Y5W3 355 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 FRMPD3Q5JV73 1810 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 A0A1B0GWJ7 208 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 DBX1A6NMT0 343 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 POM121CA8CG34 1229 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 H3BM21 787 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 H3BQ06 376 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 MEIS1O00470 390 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 MYL12BO14950 172 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 SLC22A2O15244 555 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 DHX15O43143 795 aaKnown RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 LRCH4O75427 683 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 CLN5O75503 358 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 FAM13AO94988 1023 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 RAF1P04049 648 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 ALPLP05186 524 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 CHRNGP07510 517 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 FHP07954 510 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 HBQ1P09105 142 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 CSH1P0DML2 217 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 CSH2P0DML3 217 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 C7P10643 843 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 TPH1P17752 444 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 MYL12AP19105 171 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 OXTRP30559 389 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 ICAM3P32942 547 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 ETV5P41161 510 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 PSMD4P55036 377 aaKnown RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 PCLAFQ15004 111 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 DPY19L1Q2PZI1 675 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 WSCD2Q2TBF2 565 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 PTCHD3Q3KNS1 767 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 SPDYE7PQ495Y7 208 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 CNSTQ6PJW8 725 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 NUDT18Q6ZVK8 323 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 USP45Q70EL2 814 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 RAB11FIP2Q7L804 512 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 MRPL10Q7Z7H8 261 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms